Gene info for PGA1_c13350 in Phaeobacter inhibens DSM 17395

Updated annotation (from data): Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13)
Rationale: PGA1_c13350 is annotated as putative dimethylamine corrinoid protein. Its auxotrophic phenotype is rescued by added methionine. Compared to MetH from E. cli, it has the B12-binding cap (PF02607) and B12 binding (PF02310) domains but lacks methyltransferase (PF02574) or pterin-binding (PF00809) domains or the B12 activation domain (PF02965). (auxotroph)
Original annotation: putative dimethylamine corrinoid protein
Type 1: Protein-coding gene
Located on scaffold PGA1_c, - strand, nucleotides 1,378,259 to 1,378,960
See nucleotide sequence around PGA1_c13350 or for all of scaffold PGA1_c

Other databases: NCBI, IMG: 2510179898, uniprot: I7EYQ6

Nearby Genes

500 ntPGA1_c13300 and PGA1_c13310 are separated by 136 nucleotidesPGA1_c13310 and PGA1_c13320 are separated by 12 nucleotidesPGA1_c13320 and PGA1_c13330 are separated by 94 nucleotidesPGA1_c13330 and PGA1_c13340 are separated by 34 nucleotidesPGA1_c13340 and PGA1_c13350 are separated by 1 nucleotidesPGA1_c13350 and PGA1_c13360 are separated by 221 nucleotidesPGA1_c13360 and PGA1_c13370 are separated by 73 nucleotidesPGA1_c13370 and PGA1_c13380 are separated by 91 nucleotidesPGA1_c13380 and PGA1_c13390 are separated by 113 nucleotidesPGA1_c13390 and PGA1_c13400 are separated by 338 nucleotides PGA1_c13300: PGA1_c13300 - hypothetical protein, at 1,374,976 to 1,375,500 _c13300 PGA1_c13310: PGA1_c13310 - cysteine desulfuration protein sufE-like protein, at 1,375,637 to 1,376,050 _c13310 PGA1_c13320: PGA1_c13320 - Predicted transcriptional regulator, at 1,376,063 to 1,376,773 _c13320 PGA1_c13330: PGA1_c13330 - glutathione S-transferase domain-containing protein, at 1,376,868 to 1,377,497 _c13330 PGA1_c13340: PGA1_c13340 - Accessory protein for co(II)balamin reduction (DUF1638) (EC:2.1.1.13) (from data), at 1,377,532 to 1,378,257 _c13340 PGA1_c13350: PGA1_c13350 - Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13) (from data), at 1,378,259 to 1,378,960 _c13350 PGA1_c13360: PGA1_c13360 - radical SAM domain-containing protein, at 1,379,182 to 1,380,288 _c13360 PGA1_c13370: PGA1_c13370 - Methionine synthase component, methyltransferase domain (EC:2.1.1.13) (from data), at 1,380,362 to 1,381,378 _c13370 PGA1_c13380: PGA1_c13380 - Predicted integral membrane protein, at 1,381,470 to 1,383,611 _c13380 PGA1_c13390: PGA1_c13390 - Uncharacterized conserved protein, at 1,383,725 to 1,384,042 _c13390 PGA1_c13400: PGA1_c13400 - phosphoribosylaminoimidazole-succinocarboxamide synthase PurC, at 1,384,381 to 1,385,142 _c13400
Locus Name Description Strand Phenotype
PGA1_c13300 PGA1_c13300 hypothetical protein - insig.
PGA1_c13310 PGA1_c13310 cysteine desulfuration protein sufE-like protein + no data
PGA1_c13320 PGA1_c13320 Predicted transcriptional regulator - insig.
PGA1_c13330 PGA1_c13330 glutathione S-transferase domain-containing protein + insig.
PGA1_c13340 PGA1_c13340 Accessory protein for co(II)balamin reduction (DUF1638) (EC:2.1.1.13) (from data) - strong
PGA1_c13350 PGA1_c13350 Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13) (from data) - strong
PGA1_c13360 PGA1_c13360 radical SAM domain-containing protein + insig.
PGA1_c13370 PGA1_c13370 Methionine synthase component, methyltransferase domain (EC:2.1.1.13) (from data) - cofit
PGA1_c13380 PGA1_c13380 Predicted integral membrane protein - insig.
PGA1_c13390 PGA1_c13390 Uncharacterized conserved protein - insig.
PGA1_c13400 PGA1_c13400 phosphoribosylaminoimidazole-succinocarboxamide synthase PurC + strong

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