Gene info for PGA1_c13180 in Phaeobacter inhibens DSM 17395

Updated annotation (from data): ABC transporter for D-Sorbitol, ATPase component
Rationale: Specific phenotype on D-Sorbitol.
Original annotation: ABC transporter, ATP binding protein
Type 1: Protein-coding gene
Located on scaffold PGA1_c, - strand, nucleotides 1,363,835 to 1,364,839
See nucleotide sequence around PGA1_c13180 or for all of scaffold PGA1_c

Other databases: NCBI, IMG: 2510179881, uniprot: I7DZW6

Nearby Genes

500 ntPGA1_c13130 and PGA1_c13140 are separated by 45 nucleotidesPGA1_c13140 and PGA1_c13150 are separated by 103 nucleotidesPGA1_c13150 and PGA1_c13160 are separated by 53 nucleotidesPGA1_c13160 and PGA1_c13170 are separated by 29 nucleotidesPGA1_c13170 and PGA1_c13180 overlap by 4 nucleotidesPGA1_c13180 and PGA1_c13190 are separated by 11 nucleotidesPGA1_c13190 and PGA1_c13200 are separated by 9 nucleotidesPGA1_c13200 and PGA1_c13210 are separated by 116 nucleotidesPGA1_c13210 and PGA1_c13220 are separated by 114 nucleotidesPGA1_c13220 and PGA1_c13230 are separated by 147 nucleotides PGA1_c13130: PGA1_c13130 - TRAP transporter, subunit DctM, at 1,357,033 to 1,358,508 _c13130 PGA1_c13140: PGA1_c13140 - putative TRAP transporter extracellular solute binding protein, family 7, at 1,358,554 to 1,359,612 _c13140 PGA1_c13150: PGA1_c13150 - di-haem cytochrome c peroxidase-like protein, at 1,359,716 to 1,361,515 _c13150 PGA1_c13160: PGA1_c13160 - mannitol 2-dehydrogenase MtlK, at 1,361,569 to 1,363,035 _c13160 PGA1_c13170: PGA1_c13170 - Sorbitol dehydrogenase (EC 1.1.1.14) (from data), at 1,363,065 to 1,363,838 _c13170 PGA1_c13180: PGA1_c13180 - ABC transporter for D-Sorbitol, ATPase component (from data), at 1,363,835 to 1,364,839 _c13180 PGA1_c13190: PGA1_c13190 - ABC transporter for D-Sorbitol, permease component 1 (from data), at 1,364,851 to 1,365,681 _c13190 PGA1_c13200: PGA1_c13200 - ABC transporter for D-Sorbitol, permease component 2 (from data), at 1,365,691 to 1,366,557 _c13200 PGA1_c13210: PGA1_c13210 - ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data), at 1,366,674 to 1,367,975 _c13210 PGA1_c13220: PGA1_c13220 - putative transcriptional regulator, lacI family, at 1,368,090 to 1,369,121 _c13220 PGA1_c13230: PGA1_c13230 - tRNA-Met, at 1,369,269 to 1,369,344 _c13230
Locus Name Description Strand Phenotype
PGA1_c13130 PGA1_c13130 TRAP transporter, subunit DctM + insig.
PGA1_c13140 PGA1_c13140 putative TRAP transporter extracellular solute binding protein, family 7 + insig.
PGA1_c13150 PGA1_c13150 di-haem cytochrome c peroxidase-like protein + insig.
PGA1_c13160 PGA1_c13160 mannitol 2-dehydrogenase MtlK - strong
PGA1_c13170 PGA1_c13170 Sorbitol dehydrogenase (EC 1.1.1.14) (from data) - strong
PGA1_c13180 PGA1_c13180 ABC transporter for D-Sorbitol, ATPase component (from data) - strong
PGA1_c13190 PGA1_c13190 ABC transporter for D-Sorbitol, permease component 1 (from data) - strong
PGA1_c13200 PGA1_c13200 ABC transporter for D-Sorbitol, permease component 2 (from data) - strong
PGA1_c13210 PGA1_c13210 ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data) - strong
PGA1_c13220 PGA1_c13220 putative transcriptional regulator, lacI family - strong
PGA1_c13230 PGA1_c13230 tRNA-Met - no data

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