Gene info for PGA1_c12670 in Phaeobacter inhibens DSM 17395

Updated annotation (from data): D-lactate transporter, substrate binding component
Rationale: Cofit with the other components and important for growth in various D-lactate and D,L-lactate media
Original annotation: ABC-type branched-chain amino acid transport systems, periplasmic component
Type 1: Protein-coding gene
Located on scaffold PGA1_c, - strand, nucleotides 1,312,229 to 1,313,575
See nucleotide sequence around PGA1_c12670 or for all of scaffold PGA1_c

Other databases: NCBI, IMG: 2510179830, uniprot: I7DZT5

Nearby Genes

500 ntPGA1_c12620 and PGA1_c12630 are separated by 196 nucleotidesPGA1_c12630 and PGA1_c12640 are separated by 11 nucleotidesPGA1_c12640 and PGA1_c12650 are separated by 11 nucleotidesPGA1_c12650 and PGA1_c12660 are separated by 4 nucleotidesPGA1_c12660 and PGA1_c12670 are separated by 152 nucleotidesPGA1_c12670 and PGA1_c12680 are separated by 232 nucleotidesPGA1_c12680 and PGA1_c12690 are separated by 99 nucleotidesPGA1_c12690 and PGA1_c12700 overlap by 4 nucleotidesPGA1_c12700 and PGA1_c12710 overlap by 1 nucleotidesPGA1_c12710 and PGA1_c12720 are separated by 81 nucleotides PGA1_c12620: PGA1_c12620 - putative transcriptional regulator, araC family, at 1,307,580 to 1,308,116 _c12620 PGA1_c12630: PGA1_c12630 - putative high-affinity branched-chain amino acid transport ATP-binding protein, at 1,308,313 to 1,309,068 _c12630 PGA1_c12640: PGA1_c12640 - D-lactate transporter, ATP-binding component (from data), at 1,309,080 to 1,309,835 _c12640 PGA1_c12650: PGA1_c12650 - D-lactate transporter, permease component 1 (from data), at 1,309,847 to 1,311,049 _c12650 PGA1_c12660: PGA1_c12660 - D-lactate transporter, permease component 2 (from data), at 1,311,054 to 1,312,076 _c12660 PGA1_c12670: PGA1_c12670 - D-lactate transporter, substrate binding component (from data), at 1,312,229 to 1,313,575 _c12670 PGA1_c12680: PGA1_c12680 - transcriptional regulator, at 1,313,808 to 1,315,121 _c12680 PGA1_c12690: PGA1_c12690 - two-component system response regulator, at 1,315,221 to 1,315,664 _c12690 PGA1_c12700: PGA1_c12700 - hypothetical protein, at 1,315,661 to 1,315,996 _c12700 PGA1_c12710: PGA1_c12710 - two-component system sensor histidine kinase, at 1,315,996 to 1,318,674 _c12710 PGA1_c12720: PGA1_c12720 - Flagellar motor switch protein, at 1,318,756 to 1,320,138 _c12720
Locus Name Description Strand Phenotype
PGA1_c12620 PGA1_c12620 putative transcriptional regulator, araC family - insig.
PGA1_c12630 PGA1_c12630 putative high-affinity branched-chain amino acid transport ATP-binding protein - sig.
PGA1_c12640 PGA1_c12640 D-lactate transporter, ATP-binding component (from data) - strong
PGA1_c12650 PGA1_c12650 D-lactate transporter, permease component 1 (from data) - sig.
PGA1_c12660 PGA1_c12660 D-lactate transporter, permease component 2 (from data) - strong
PGA1_c12670 PGA1_c12670 D-lactate transporter, substrate binding component (from data) - sig.
PGA1_c12680 PGA1_c12680 transcriptional regulator + sig.
PGA1_c12690 PGA1_c12690 two-component system response regulator + sig.
PGA1_c12700 PGA1_c12700 hypothetical protein + sig.
PGA1_c12710 PGA1_c12710 two-component system sensor histidine kinase + sig.
PGA1_c12720 PGA1_c12720 Flagellar motor switch protein + cofit

Or browse nearby genes

Or see the comparative fitness browser