Gene info for PGA1_c10280 in Phaeobacter inhibens DSM 17395

Updated annotation (from data): Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
Rationale: Specifically important for utilizing L-Leucine. Automated validation from mutant phenotype: the predicted function (RXN0-2301) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: isovaleryl-CoA dehydrogenase
Type 1: Protein-coding gene
Located on scaffold PGA1_c, + strand, nucleotides 1,065,289 to 1,066,449
See nucleotide sequence around PGA1_c10280 or for all of scaffold PGA1_c

Other databases: NCBI, IMG: 2510179590, uniprot: I7DNV3

Nearby Genes

500 ntPGA1_c10230 and PGA1_c10240 overlap by 1 nucleotidesPGA1_c10240 and PGA1_c10250 are separated by 132 nucleotidesPGA1_c10250 and PGA1_c10260 are separated by 63 nucleotidesPGA1_c10260 and PGA1_c10270 are separated by 51 nucleotidesPGA1_c10270 and PGA1_c10280 are separated by 204 nucleotidesPGA1_c10280 and PGA1_c10290 are separated by 141 nucleotidesPGA1_c10290 and PGA1_c10300 are separated by 164 nucleotidesPGA1_c10300 and PGA1_c10310 are separated by 137 nucleotidesPGA1_c10310 and PGA1_c10320 are separated by 17 nucleotidesPGA1_c10320 and PGA1_c10330 are separated by 9 nucleotides PGA1_c10230: PGA1_c10230 - glucosamine--fructose-6-phosphate aminotransferase GlmS, at 1,058,735 to 1,060,543 _c10230 PGA1_c10240: PGA1_c10240 - bifunctional enzyme GlmU, at 1,060,543 to 1,061,898 _c10240 PGA1_c10250: PGA1_c10250 - phosphoglycolate phosphatase-like protein, at 1,062,031 to 1,062,696 _c10250 PGA1_c10260: PGA1_c10260 - putative pyridoxal-phosphate-dependent aminotransferase, at 1,062,760 to 1,063,968 _c10260 PGA1_c10270: PGA1_c10270 - hypothetical protein, at 1,064,020 to 1,065,084 _c10270 PGA1_c10280: PGA1_c10280 - Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data), at 1,065,289 to 1,066,449 _c10280 PGA1_c10290: PGA1_c10290 - outer membrane protein, at 1,066,591 to 1,067,193 _c10290 PGA1_c10300: PGA1_c10300 - acetyl-coenzyme A synthetase AcsA, at 1,067,358 to 1,068,908 _c10300 PGA1_c10310: PGA1_c10310 - hypothetical protein, at 1,069,046 to 1,069,381 _c10310 PGA1_c10320: PGA1_c10320 - methylcrotonoyl-CoA carboxylase beta chain, at 1,069,399 to 1,070,982 _c10320 PGA1_c10330: PGA1_c10330 - methylcrotonoyl-CoA carboxylase subunit alpha, at 1,070,992 to 1,072,929 _c10330
Locus Name Description Strand Phenotype
PGA1_c10230 PGA1_c10230 glucosamine--fructose-6-phosphate aminotransferase GlmS - no data
PGA1_c10240 PGA1_c10240 bifunctional enzyme GlmU - no data
PGA1_c10250 PGA1_c10250 phosphoglycolate phosphatase-like protein + strong
PGA1_c10260 PGA1_c10260 putative pyridoxal-phosphate-dependent aminotransferase + strong
PGA1_c10270 PGA1_c10270 hypothetical protein - sig.
PGA1_c10280 PGA1_c10280 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) + strong
PGA1_c10290 PGA1_c10290 outer membrane protein - sig.
PGA1_c10300 PGA1_c10300 acetyl-coenzyme A synthetase AcsA + strong
PGA1_c10310 PGA1_c10310 hypothetical protein + sig.
PGA1_c10320 PGA1_c10320 methylcrotonoyl-CoA carboxylase beta chain + no data
PGA1_c10330 PGA1_c10330 methylcrotonoyl-CoA carboxylase subunit alpha + no data

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