Gene info for EX31_RS09780 in Rahnella sp. WP5

Annotation: 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
Type 1: Protein-coding gene
Located on scaffold NZ_JQJR01000010, - strand, nucleotides 161,535 to 162,410
See nucleotide sequence around EX31_RS09780 or for all of scaffold NZ_JQJR01000010

Other databases: NCBI

Nearby Genes

500 ntEX31_RS09755 and EX31_RS09760 are separated by 101 nucleotidesEX31_RS09760 and EX31_RS09765 are separated by 381 nucleotidesEX31_RS09765 and EX31_RS09770 are separated by 91 nucleotidesEX31_RS09770 and EX31_RS09775 are separated by 197 nucleotidesEX31_RS09775 and EX31_RS09780 are separated by 3 nucleotidesEX31_RS09780 and EX31_RS09785 are separated by 19 nucleotidesEX31_RS09785 and EX31_RS09790 are separated by 13 nucleotidesEX31_RS09790 and EX31_RS09795 overlap by 1 nucleotidesEX31_RS09795 and EX31_RS09800 overlap by 7 nucleotidesEX31_RS09800 and EX31_RS09805 are separated by 231 nucleotides EX31_RS09755: EX31_RS09755 - xylose ABC transporter ATP-binding protein, at 155,200 to 156,705 _RS09755 EX31_RS09760: EX31_RS09760 - D-xylose ABC transporter substrate-binding protein, at 156,807 to 157,799 _RS09760 EX31_RS09765: EX31_RS09765 - xylose isomerase, at 158,181 to 159,500 _RS09765 EX31_RS09770: EX31_RS09770 - xylulokinase, at 159,592 to 161,043 _RS09770 EX31_RS09775: EX31_RS09775 - (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase, at 161,241 to 161,531 _RS09775 EX31_RS09780: EX31_RS09780 - 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase, at 161,535 to 162,410 _RS09780 EX31_RS09785: EX31_RS09785 - autoinducer 2 ABC transporter substrate-binding protein LsrB, at 162,430 to 163,446 _RS09785 EX31_RS09790: EX31_RS09790 - autoinducer 2 ABC transporter permease LsrD, at 163,460 to 164,485 _RS09790 EX31_RS09795: EX31_RS09795 - autoinducer 2 ABC transporter permease LsrC, at 164,485 to 165,561 _RS09795 EX31_RS09800: EX31_RS09800 - autoinducer 2 ABC transporter ATP-binding protein LsrA, at 165,555 to 167,117 _RS09800 EX31_RS09805: EX31_RS09805 - transcriptional regulator LsrR, at 167,349 to 168,323 _RS09805
Locus Name Description Strand Phenotype
EX31_RS09755 EX31_RS09755 xylose ABC transporter ATP-binding protein - insig.
EX31_RS09760 EX31_RS09760 D-xylose ABC transporter substrate-binding protein - insig.
EX31_RS09765 EX31_RS09765 xylose isomerase + strong
EX31_RS09770 EX31_RS09770 xylulokinase + strong
EX31_RS09775 EX31_RS09775 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase - insig.
EX31_RS09780 EX31_RS09780 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase - insig.
EX31_RS09785 EX31_RS09785 autoinducer 2 ABC transporter substrate-binding protein LsrB - insig.
EX31_RS09790 EX31_RS09790 autoinducer 2 ABC transporter permease LsrD - insig.
EX31_RS09795 EX31_RS09795 autoinducer 2 ABC transporter permease LsrC - insig.
EX31_RS09800 EX31_RS09800 autoinducer 2 ABC transporter ATP-binding protein LsrA - insig.
EX31_RS09805 EX31_RS09805 transcriptional regulator LsrR + insig.

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