Gene info for EX31_RS02540 in Rahnella sp. WP5

Annotation: helix-turn-helix transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_JQJR01000005, + strand, nucleotides 540,077 to 540,622
See nucleotide sequence around EX31_RS02540 or for all of scaffold NZ_JQJR01000005

Other databases: NCBI

Nearby Genes

500 ntEX31_RS02515 and EX31_RS02520 overlap by 8 nucleotidesEX31_RS02520 and EX31_RS02525 are separated by 47 nucleotidesEX31_RS02525 and EX31_RS02530 are separated by 1 nucleotidesEX31_RS02530 and EX31_RS02535 are separated by 58 nucleotidesEX31_RS02535 and EX31_RS02540 are separated by 430 nucleotidesEX31_RS02540 and EX31_RS02545 are separated by 3 nucleotidesEX31_RS02545 and EX31_RS02550 overlap by 11 nucleotidesEX31_RS02550 and EX31_RS02555 overlap by 4 nucleotidesEX31_RS02555 and EX31_RS02560 overlap by 8 nucleotidesEX31_RS02560 and EX31_RS02565 overlap by 26 nucleotides EX31_RS02515: EX31_RS02515 - PAS domain-containing protein, at 532,424 to 533,737 _RS02515 EX31_RS02520: EX31_RS02520 - sigma-54-dependent Fis family transcriptional regulator, at 533,730 to 535,142 _RS02520 EX31_RS02525: EX31_RS02525 - ABC transporter permease, at 535,190 to 537,619 _RS02525 EX31_RS02530: EX31_RS02530 - ABC transporter ATP-binding protein, at 537,621 to 538,337 _RS02530 EX31_RS02535: EX31_RS02535 - HlyD family efflux transporter periplasmic adaptor subunit, at 538,396 to 539,646 _RS02535 EX31_RS02540: EX31_RS02540 - helix-turn-helix transcriptional regulator, at 540,077 to 540,622 _RS02540 EX31_RS02545: EX31_RS02545 - alpha/beta hydrolase, at 540,626 to 541,681 _RS02545 EX31_RS02550: EX31_RS02550 - MATE family efflux transporter, at 541,671 to 543,023 _RS02550 EX31_RS02555: EX31_RS02555 - hypothetical protein, at 543,020 to 543,661 _RS02555 EX31_RS02560: EX31_RS02560 - hypothetical protein, at 543,654 to 543,914 _RS02560 EX31_RS02565: EX31_RS02565 - 3-oxoacyl-ACP synthase, at 543,889 to 544,848 _RS02565
Locus Name Description Strand Phenotype
EX31_RS02515 EX31_RS02515 PAS domain-containing protein - strong
EX31_RS02520 EX31_RS02520 sigma-54-dependent Fis family transcriptional regulator - strong
EX31_RS02525 EX31_RS02525 ABC transporter permease - sig.
EX31_RS02530 EX31_RS02530 ABC transporter ATP-binding protein - strong
EX31_RS02535 EX31_RS02535 HlyD family efflux transporter periplasmic adaptor subunit - insig.
EX31_RS02540 EX31_RS02540 helix-turn-helix transcriptional regulator + strong
EX31_RS02545 EX31_RS02545 alpha/beta hydrolase - insig.
EX31_RS02550 EX31_RS02550 MATE family efflux transporter - sig.
EX31_RS02555 EX31_RS02555 hypothetical protein - insig.
EX31_RS02560 EX31_RS02560 hypothetical protein - insig.
EX31_RS02565 EX31_RS02565 3-oxoacyl-ACP synthase - insig.

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