Gene info for ECOLIN_RS23500 in Escherichia coli Nissle 1917

Annotation: c-di-GMP phosphodiesterase PdeC
Type 1: Protein-coding gene
Located on scaffold NZ_CP007799, + strand, nucleotides 4,735,205 to 4,736,758
See nucleotide sequence around ECOLIN_RS23500 or for all of scaffold NZ_CP007799

Other databases: NCBI

Nearby Genes

500 ntECOLIN_RS23475 and ECOLIN_RS23480 are separated by 3 nucleotidesECOLIN_RS23480 and ECOLIN_RS23485 are separated by 34 nucleotidesECOLIN_RS23485 and ECOLIN_RS23490 are separated by 254 nucleotidesECOLIN_RS23490 and ECOLIN_RS23495 are separated by 98 nucleotidesECOLIN_RS23495 and ECOLIN_RS23500 are separated by 428 nucleotidesECOLIN_RS23500 and ECOLIN_RS23505 are separated by 35 nucleotidesECOLIN_RS23505 and ECOLIN_RS23510 are separated by 85 nucleotidesECOLIN_RS23510 and ECOLIN_RS23515 are separated by 547 nucleotidesECOLIN_RS23515 and ECOLIN_RS23520 are separated by 150 nucleotidesECOLIN_RS23520 and ECOLIN_RS23525 are separated by 35 nucleotides ECOLIN_RS23475: ECOLIN_RS23475 - secondary thiamine-phosphate synthase enzyme YjbQ, at 4,729,972 to 4,730,388 _RS23475 ECOLIN_RS23480: ECOLIN_RS23480 - MmcQ/YjbR family DNA-binding protein, at 4,730,392 to 4,730,748 _RS23480 ECOLIN_RS23485: ECOLIN_RS23485 - excinuclease ABC subunit UvrA, at 4,730,783 to 4,733,605 _RS23485 ECOLIN_RS23490: ECOLIN_RS23490 - single-stranded DNA-binding protein SSB1, at 4,733,860 to 4,734,396 _RS23490 ECOLIN_RS23495: ECOLIN_RS23495 - YjcB family protein, at 4,734,495 to 4,734,776 _RS23495 ECOLIN_RS23500: ECOLIN_RS23500 - c-di-GMP phosphodiesterase PdeC, at 4,735,205 to 4,736,758 _RS23500 ECOLIN_RS23505: ECOLIN_RS23505 - superoxide response transcriptional regulator SoxS, at 4,736,794 to 4,737,117 _RS23505 ECOLIN_RS23510: ECOLIN_RS23510 - redox-sensitive transcriptional activator SoxR, at 4,737,203 to 4,737,667 _RS23510 ECOLIN_RS23515: ECOLIN_RS23515 - guanine/hypoxanthine transporter GhxP, at 4,738,215 to 4,739,564 _RS23515 ECOLIN_RS23520: ECOLIN_RS23520 - Na+/H+ antiporter, at 4,739,715 to 4,741,364 _RS23520 ECOLIN_RS23525: ECOLIN_RS23525 - LysR family transcriptional regulator, at 4,741,400 to 4,742,284 _RS23525
Locus Name Description Strand Phenotype
ECOLIN_RS23475 ECOLIN_RS23475 secondary thiamine-phosphate synthase enzyme YjbQ + insig.
ECOLIN_RS23480 ECOLIN_RS23480 MmcQ/YjbR family DNA-binding protein + insig.
ECOLIN_RS23485 ECOLIN_RS23485 excinuclease ABC subunit UvrA - cofit
ECOLIN_RS23490 ECOLIN_RS23490 single-stranded DNA-binding protein SSB1 + no data
ECOLIN_RS23495 ECOLIN_RS23495 YjcB family protein - insig.
ECOLIN_RS23500 ECOLIN_RS23500 c-di-GMP phosphodiesterase PdeC + insig.
ECOLIN_RS23505 ECOLIN_RS23505 superoxide response transcriptional regulator SoxS - no data
ECOLIN_RS23510 ECOLIN_RS23510 redox-sensitive transcriptional activator SoxR + insig.
ECOLIN_RS23515 ECOLIN_RS23515 guanine/hypoxanthine transporter GhxP + insig.
ECOLIN_RS23520 ECOLIN_RS23520 Na+/H+ antiporter + cofit
ECOLIN_RS23525 ECOLIN_RS23525 LysR family transcriptional regulator - insig.

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