Gene info for ECOLIN_RS16125 in Escherichia coli Nissle 1917

Annotation: site-specific tyrosine recombinase XerD
Type 1: Protein-coding gene
Located on scaffold NZ_CP007799, - strand, nucleotides 3,271,451 to 3,272,347
See nucleotide sequence around ECOLIN_RS16125 or for all of scaffold NZ_CP007799

Other databases: NCBI

Nearby Genes

500 ntECOLIN_RS16100 and ECOLIN_RS16105 are separated by 92 nucleotidesECOLIN_RS16105 and ECOLIN_RS16110 are separated by 9 nucleotidesECOLIN_RS16110 and ECOLIN_RS16115 are separated by 90 nucleotidesECOLIN_RS16115 and ECOLIN_RS16120 are separated by 5 nucleotidesECOLIN_RS16120 and ECOLIN_RS16125 are separated by 24 nucleotidesECOLIN_RS16125 and ECOLIN_RS16130 are separated by 111 nucleotidesECOLIN_RS16130 and ECOLIN_RS16135 are separated by 39 nucleotidesECOLIN_RS16135 and ECOLIN_RS16140 overlap by 20 nucleotidesECOLIN_RS16140 and ECOLIN_RS16145 are separated by 242 nucleotidesECOLIN_RS16145 and ECOLIN_RS16150 are separated by 76 nucleotides ECOLIN_RS16100: ECOLIN_RS16100 - isopentenyl-diphosphate Delta-isomerase, at 3,265,620 to 3,266,168 _RS16100 ECOLIN_RS16105: ECOLIN_RS16105 - lysine--tRNA ligase, at 3,266,261 to 3,267,778 _RS16105 ECOLIN_RS16110: ECOLIN_RS16110 - peptide chain release factor 2, at 3,267,788 to 3,268,886 _RS16110 ECOLIN_RS16115: ECOLIN_RS16115 - single-stranded-DNA-specific exonuclease RecJ, at 3,268,977 to 3,270,710 _RS16115 ECOLIN_RS16120: ECOLIN_RS16120 - bifunctional protein-disulfide isomerase/oxidoreductase DsbC, at 3,270,716 to 3,271,426 _RS16120 ECOLIN_RS16125: ECOLIN_RS16125 - site-specific tyrosine recombinase XerD, at 3,271,451 to 3,272,347 _RS16125 ECOLIN_RS16130: ECOLIN_RS16130 - flavodoxin FldB, at 3,272,459 to 3,272,980 _RS16130 ECOLIN_RS16135: ECOLIN_RS16135 - protein YgfX, at 3,273,020 to 3,273,427 _RS16135 ECOLIN_RS16140: ECOLIN_RS16140 - FAD assembly factor SdhE, at 3,273,408 to 3,273,674 _RS16140 ECOLIN_RS16145: ECOLIN_RS16145 - tRNA-modifying protein YgfZ, at 3,273,917 to 3,274,897 _RS16145 ECOLIN_RS16150: ECOLIN_RS16150 - hemolysin III family protein, at 3,274,974 to 3,275,633 _RS16150
Locus Name Description Strand Phenotype
ECOLIN_RS16100 ECOLIN_RS16100 isopentenyl-diphosphate Delta-isomerase + no data
ECOLIN_RS16105 ECOLIN_RS16105 lysine--tRNA ligase - cofit
ECOLIN_RS16110 ECOLIN_RS16110 peptide chain release factor 2 - no data
ECOLIN_RS16115 ECOLIN_RS16115 single-stranded-DNA-specific exonuclease RecJ - cofit
ECOLIN_RS16120 ECOLIN_RS16120 bifunctional protein-disulfide isomerase/oxidoreductase DsbC - cofit
ECOLIN_RS16125 ECOLIN_RS16125 site-specific tyrosine recombinase XerD - cofit
ECOLIN_RS16130 ECOLIN_RS16130 flavodoxin FldB + strong
ECOLIN_RS16135 ECOLIN_RS16135 protein YgfX - no data
ECOLIN_RS16140 ECOLIN_RS16140 FAD assembly factor SdhE - insig.
ECOLIN_RS16145 ECOLIN_RS16145 tRNA-modifying protein YgfZ + no data
ECOLIN_RS16150 ECOLIN_RS16150 hemolysin III family protein - insig.

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