Gene info for CSW01_12700 in Vibrio cholerae E7946 ATCC 55056

Annotation: RNA pseudouridine synthase
Type 1: Protein-coding gene
Located on scaffold CP024162, - strand, nucleotides 2,724,074 to 2,724,811
See nucleotide sequence around CSW01_12700 or for all of scaffold CP024162

Other databases: NCBI

Nearby Genes

500 ntCSW01_12675 and CSW01_12680 are separated by 193 nucleotidesCSW01_12680 and CSW01_12685 are separated by 83 nucleotidesCSW01_12685 and CSW01_12690 are separated by 93 nucleotidesCSW01_12690 and CSW01_12695 are separated by 77 nucleotidesCSW01_12695 and CSW01_12700 are separated by 39 nucleotidesCSW01_12700 and CSW01_12705 are separated by 96 nucleotidesCSW01_12705 and CSW01_12710 overlap by 2 nucleotidesCSW01_12710 and CSW01_12715 are separated by 204 nucleotidesCSW01_12715 and CSW01_12720 are separated by 149 nucleotidesCSW01_12720 and CSW01_12725 are separated by 249 nucleotides CSW01_12675: CSW01_12675 - LPS export ABC transporter permease LptF, at 2,716,686 to 2,717,786 _12675 CSW01_12680: CSW01_12680 - cytosol aminopeptidase, at 2,717,980 to 2,719,491 _12680 CSW01_12685: CSW01_12685 - DNA polymerase III subunit chi, at 2,719,575 to 2,720,024 _12685 CSW01_12690: CSW01_12690 - valine--tRNA ligase, at 2,720,118 to 2,722,979 _12690 CSW01_12695: CSW01_12695 - lactate dehydrogenase, at 2,723,057 to 2,724,034 _12695 CSW01_12700: CSW01_12700 - RNA pseudouridine synthase, at 2,724,074 to 2,724,811 _12700 CSW01_12705: CSW01_12705 - RNA polymerase-associated protein RapA, at 2,724,908 to 2,727,817 _12705 CSW01_12710: CSW01_12710 - hypothetical protein, at 2,727,816 to 2,728,034 _12710 CSW01_12715: CSW01_12715 - ribonuclease, at 2,728,239 to 2,729,615 _12715 CSW01_12720: CSW01_12720 - ornithine carbamoyltransferase, at 2,729,765 to 2,730,769 _12720 CSW01_12725: CSW01_12725 - aspartate carbamoyltransferase, at 2,731,019 to 2,731,948 _12725
Locus Name Description Strand Phenotype
CSW01_12675 CSW01_12675 LPS export ABC transporter permease LptF - no data
CSW01_12680 CSW01_12680 cytosol aminopeptidase + strong
CSW01_12685 CSW01_12685 DNA polymerase III subunit chi + insig.
CSW01_12690 CSW01_12690 valine--tRNA ligase + no data
CSW01_12695 CSW01_12695 lactate dehydrogenase - insig.
CSW01_12700 CSW01_12700 RNA pseudouridine synthase - insig.
CSW01_12705 CSW01_12705 RNA polymerase-associated protein RapA - insig.
CSW01_12710 CSW01_12710 hypothetical protein + cofit
CSW01_12715 CSW01_12715 ribonuclease + insig.
CSW01_12720 CSW01_12720 ornithine carbamoyltransferase + insig.
CSW01_12725 CSW01_12725 aspartate carbamoyltransferase + cofit

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