Gene info for CSW01_12260 in Vibrio cholerae E7946 ATCC 55056

Annotation: 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
Type 1: Protein-coding gene
Located on scaffold CP024162, - strand, nucleotides 2,626,635 to 2,627,180
See nucleotide sequence around CSW01_12260 or for all of scaffold CP024162

Other databases: NCBI

Nearby Genes

500 ntCSW01_12235 and CSW01_12240 are separated by 44 nucleotidesCSW01_12240 and CSW01_12245 are separated by 58 nucleotidesCSW01_12245 and CSW01_12250 are separated by 16 nucleotidesCSW01_12250 and CSW01_12255 are separated by 137 nucleotidesCSW01_12255 and CSW01_12260 are separated by 277 nucleotidesCSW01_12260 and CSW01_12265 are separated by 295 nucleotidesCSW01_12265 and CSW01_12270 are separated by 244 nucleotidesCSW01_12270 and CSW01_12275 overlap by 1 nucleotidesCSW01_12275 and CSW01_12280 are separated by 42 nucleotidesCSW01_12280 and CSW01_12285 are separated by 57 nucleotides CSW01_12235: CSW01_12235 - bifunctional metallophosphatase/5'-nucleotidase, at 2,620,277 to 2,622,181 _12235 CSW01_12240: CSW01_12240 - single-stranded-DNA-specific exonuclease RecJ, at 2,622,226 to 2,623,965 _12240 CSW01_12245: CSW01_12245 - bifunctional protein-disulfide isomerase/oxidoreductase DsbC, at 2,624,024 to 2,624,776 _12245 CSW01_12250: CSW01_12250 - site-specific tyrosine recombinase XerD, at 2,624,793 to 2,625,701 _12250 CSW01_12255: CSW01_12255 - flavodoxin FldB, at 2,625,839 to 2,626,357 _12255 CSW01_12260: CSW01_12260 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 2,626,635 to 2,627,180 _12260 CSW01_12265: CSW01_12265 - carboxylating nicotinate-nucleotide diphosphorylase, at 2,627,476 to 2,628,366 _12265 CSW01_12270: CSW01_12270 - prepilin-type cleavage/methylation domain-containing protein, at 2,628,611 to 2,629,072 _12270 CSW01_12275: CSW01_12275 - type IV-A pilus assembly ATPase PilB, at 2,629,072 to 2,630,760 _12275 CSW01_12280: CSW01_12280 - type IV pilin assembly protein PilC, at 2,630,803 to 2,632,029 _12280 CSW01_12285: CSW01_12285 - prepilin peptidase, at 2,632,087 to 2,632,962 _12285
Locus Name Description Strand Phenotype
CSW01_12235 CSW01_12235 bifunctional metallophosphatase/5'-nucleotidase + insig.
CSW01_12240 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ - insig.
CSW01_12245 CSW01_12245 bifunctional protein-disulfide isomerase/oxidoreductase DsbC - insig.
CSW01_12250 CSW01_12250 site-specific tyrosine recombinase XerD - strong
CSW01_12255 CSW01_12255 flavodoxin FldB + cofit
CSW01_12260 CSW01_12260 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD - cofit
CSW01_12265 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase + cofit
CSW01_12270 CSW01_12270 prepilin-type cleavage/methylation domain-containing protein + insig.
CSW01_12275 CSW01_12275 type IV-A pilus assembly ATPase PilB + insig.
CSW01_12280 CSW01_12280 type IV pilin assembly protein PilC + insig.
CSW01_12285 CSW01_12285 prepilin peptidase + no data

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