Gene info for CSW01_08220 in Vibrio cholerae E7946 ATCC 55056

Annotation: 16S rRNA pseudouridine(516) synthase
Type 1: Protein-coding gene
Located on scaffold CP024162, - strand, nucleotides 1,759,740 to 1,760,435
See nucleotide sequence around CSW01_08220 or for all of scaffold CP024162

Other databases: NCBI

Nearby Genes

500 ntCSW01_08195 and CSW01_08200 are separated by 125 nucleotidesCSW01_08200 and CSW01_08205 are separated by 127 nucleotidesCSW01_08205 and CSW01_08210 are separated by 66 nucleotidesCSW01_08210 and CSW01_08215 overlap by 79 nucleotidesCSW01_08215 and CSW01_08220 are separated by 318 nucleotidesCSW01_08220 and CSW01_08225 are separated by 133 nucleotidesCSW01_08225 and CSW01_08230 are separated by 264 nucleotidesCSW01_08230 and CSW01_08235 are separated by 11 nucleotidesCSW01_08235 and CSW01_08240 overlap by 26 nucleotidesCSW01_08240 and CSW01_08245 are separated by 157 nucleotides CSW01_08195: CSW01_08195 - ABC transporter ATP-binding protein, at 1,753,753 to 1,754,424 _08195 CSW01_08200: CSW01_08200 - MATE family efflux transporter, at 1,754,550 to 1,755,926 _08200 CSW01_08205: CSW01_08205 - DUF2867 domain-containing protein, at 1,756,054 to 1,757,490 _08205 CSW01_08210: CSW01_08210 - DUF2913 domain-containing protein, at 1,757,557 to 1,758,294 _08210 CSW01_08215: CSW01_08215 - Bcr/CflA family drug resistance efflux transporter, at 1,758,216 to 1,759,421 _08215 CSW01_08220: CSW01_08220 - 16S rRNA pseudouridine(516) synthase, at 1,759,740 to 1,760,435 _08220 CSW01_08225: CSW01_08225 - ATP-dependent helicase, at 1,760,569 to 1,762,353 _08225 CSW01_08230: CSW01_08230 - hypothetical protein, at 1,762,618 to 1,763,025 _08230 CSW01_08235: CSW01_08235 - DNA-binding response regulator, at 1,763,037 to 1,763,696 _08235 CSW01_08240: CSW01_08240 - ATP-binding protein, at 1,763,671 to 1,765,059 _08240 CSW01_08245: CSW01_08245 - 50S ribosomal protein L25, at 1,765,217 to 1,765,495 _08245
Locus Name Description Strand Phenotype
CSW01_08195 CSW01_08195 ABC transporter ATP-binding protein - cofit
CSW01_08200 CSW01_08200 MATE family efflux transporter - cofit
CSW01_08205 CSW01_08205 DUF2867 domain-containing protein + insig.
CSW01_08210 CSW01_08210 DUF2913 domain-containing protein - insig.
CSW01_08215 CSW01_08215 Bcr/CflA family drug resistance efflux transporter - insig.
CSW01_08220 CSW01_08220 16S rRNA pseudouridine(516) synthase - insig.
CSW01_08225 CSW01_08225 ATP-dependent helicase + insig.
CSW01_08230 CSW01_08230 hypothetical protein + insig.
CSW01_08235 CSW01_08235 DNA-binding response regulator + cofit
CSW01_08240 CSW01_08240 ATP-binding protein + sig.
CSW01_08245 CSW01_08245 50S ribosomal protein L25 + no data

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