Gene info for CSW01_04560 in Vibrio cholerae E7946 ATCC 55056

Annotation: 1-deoxy-D-xylulose-5-phosphate synthase
Type 1: Protein-coding gene
Located on scaffold CP024162, - strand, nucleotides 946,262 to 948,142
See nucleotide sequence around CSW01_04560 or for all of scaffold CP024162

Other databases: NCBI

Nearby Genes

500 ntCSW01_04535 and CSW01_04540 overlap by 44 nucleotidesCSW01_04540 and CSW01_04545 are separated by 3 nucleotidesCSW01_04545 and CSW01_04550 are separated by 88 nucleotidesCSW01_04550 and CSW01_04555 are separated by 0 nucleotidesCSW01_04555 and CSW01_04560 are separated by 97 nucleotidesCSW01_04560 and CSW01_04565 are separated by 19 nucleotidesCSW01_04565 and CSW01_04570 are separated by 41 nucleotidesCSW01_04570 and CSW01_04575 are separated by 314 nucleotidesCSW01_04575 and CSW01_04580 are separated by 11 nucleotidesCSW01_04580 and CSW01_04585 are separated by 303 nucleotides CSW01_04535: CSW01_04535 - N-acetyltransferase, at 943,106 to 943,729 _04535 CSW01_04540: CSW01_04540 - DUF3301 domain-containing protein, at 943,686 to 943,988 _04540 CSW01_04545: CSW01_04545 - DUF3549 domain-containing protein, at 943,992 to 945,029 _04545 CSW01_04550: CSW01_04550 - pseudouridine synthase, at 945,118 to 945,429 _04550 CSW01_04555: CSW01_04555 - tRNA pseudouridine(65) synthase TruC, at 945,430 to 946,164 _04555 CSW01_04560: CSW01_04560 - 1-deoxy-D-xylulose-5-phosphate synthase, at 946,262 to 948,142 _04560 CSW01_04565: CSW01_04565 - (2E,6E)-farnesyl diphosphate synthase, at 948,162 to 949,046 _04565 CSW01_04570: CSW01_04570 - exodeoxyribonuclease 7 small subunit, at 949,088 to 949,330 _04570 CSW01_04575: CSW01_04575 - flagellar motor protein PomA, at 949,645 to 950,409 _04575 CSW01_04580: CSW01_04580 - flagellar motor protein MotB, at 950,421 to 951,377 _04580 CSW01_04585: CSW01_04585 - tRNA 4-thiouridine(8) synthase ThiI, at 951,681 to 953,132 _04585
Locus Name Description Strand Phenotype
CSW01_04535 CSW01_04535 N-acetyltransferase + cofit
CSW01_04540 CSW01_04540 DUF3301 domain-containing protein - insig.
CSW01_04545 CSW01_04545 DUF3549 domain-containing protein - insig.
CSW01_04550 CSW01_04550 pseudouridine synthase + insig.
CSW01_04555 CSW01_04555 tRNA pseudouridine(65) synthase TruC + insig.
CSW01_04560 CSW01_04560 1-deoxy-D-xylulose-5-phosphate synthase - no data
CSW01_04565 CSW01_04565 (2E,6E)-farnesyl diphosphate synthase - no data
CSW01_04570 CSW01_04570 exodeoxyribonuclease 7 small subunit - cofit
CSW01_04575 CSW01_04575 flagellar motor protein PomA + cofit
CSW01_04580 CSW01_04580 flagellar motor protein MotB + cofit
CSW01_04585 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI + cofit

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