Gene info for CCNA_00003 in Caulobacter crescentus NA1000

Updated annotation (from data): shikimate dehydrogenase (EC 1.1.1.25)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00507.
Original annotation: shikimate 5-dehydrogenase
Type 1: Protein-coding gene
Located on scaffold NC_011916, + strand, nucleotides 1,700 to 2,557
See nucleotide sequence around CCNA_00003 or for all of scaffold NC_011916

Other databases: NCBI, uniprot: B8GWW0

Nearby Genes

500 ntCCNA_00001 and CCNA_00002 overlap by 4 nucleotidesCCNA_00002 and CCNA_00003 overlap by 4 nucleotidesCCNA_00003 and CCNA_00004 are separated by 1 nucleotidesCCNA_00004 and CCNA_00005 are separated by 31 nucleotidesCCNA_00005 and CCNA_00006 are separated by 118 nucleotidesCCNA_00006 and CCNA_00007 are separated by 149 nucleotidesCCNA_00007 and CCNA_00008 are separated by 400 nucleotides CCNA_00001: CCNA_00001 - ATP/GTP-binding protein, at 202 to 1,107 _00001 CCNA_00002: CCNA_00002 - septum formation protein Maf, at 1,104 to 1,703 _00002 CCNA_00003: CCNA_00003 - shikimate dehydrogenase (EC 1.1.1.25) (from data), at 1,700 to 2,557 _00003 CCNA_00004: CCNA_00004 - dephospho-CoA kinase, at 2,559 to 3,158 _00004 CCNA_00005: CCNA_00005 - DNA polymerase III, epsilon chain, at 3,190 to 3,903 _00005 CCNA_00006: CCNA_00006 - enoyl-CoA hydratase, at 4,022 to 4,810 _00006 CCNA_00007: CCNA_00007 - SSU ribosomal protein S20P, at 4,960 to 5,235 _00007 CCNA_00008: CCNA_00008 - chromosome replication initiator protein DnaA, at 5,636 to 7,108 _00008
Locus Name Description Strand Phenotype
CCNA_00001 CCNA_00001 ATP/GTP-binding protein + strong
CCNA_00002 CCNA_00002 septum formation protein Maf + strong
CCNA_00003 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) + strong
CCNA_00004 CCNA_00004 dephospho-CoA kinase + no data
CCNA_00005 CCNA_00005 DNA polymerase III, epsilon chain + no data
CCNA_00006 CCNA_00006 enoyl-CoA hydratase + strong
CCNA_00007 CCNA_00007 SSU ribosomal protein S20P + no data
CCNA_00008 CCNA_00008 chromosome replication initiator protein DnaA + no data

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