Gene info for CA265_RS18485 in Pedobacter sp. GW460-11-11-14-LB5

Updated annotation (from data): arginosuccinate lyase (EC 4.3.2.1)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00838.
Original annotation: argininosuccinate lyase
Type 1: Protein-coding gene
Located on scaffold NZ_CP021237, - strand, nucleotides 4,599,274 to 4,600,605
See nucleotide sequence around CA265_RS18485 or for all of scaffold NZ_CP021237

Other databases: NCBI, uniprot: A0A1X9Z970

Nearby Genes

500 ntCA265_RS18460 and CA265_RS18465 are separated by 11 nucleotidesCA265_RS18465 and CA265_RS18470 are separated by 402 nucleotidesCA265_RS18470 and CA265_RS18475 are separated by 31 nucleotidesCA265_RS18475 and CA265_RS18480 overlap by 1 nucleotidesCA265_RS18480 and CA265_RS18485 are separated by 20 nucleotidesCA265_RS18485 and CA265_RS18490 are separated by 30 nucleotidesCA265_RS18490 and CA265_RS18495 overlap by 1 nucleotidesCA265_RS18495 and CA265_RS18500 are separated by 40 nucleotidesCA265_RS18500 and CA265_RS18505 are separated by 120 nucleotidesCA265_RS18505 and CA265_RS18510 are separated by 149 nucleotides CA265_RS18460: CA265_RS18460 - nucleotidyltransferase, at 4,594,548 to 4,595,609 _RS18460 CA265_RS18465: CA265_RS18465 - RNA-splicing ligase RtcB, at 4,595,621 to 4,597,045 _RS18465 CA265_RS18470: CA265_RS18470 - aminotransferase, at 4,597,448 to 4,598,701 _RS18470 CA265_RS18475: CA265_RS18475 - hypothetical protein, at 4,598,733 to 4,599,065 _RS18475 CA265_RS18480: CA265_RS18480 - hypothetical protein, at 4,599,065 to 4,599,253 _RS18480 CA265_RS18485: CA265_RS18485 - arginosuccinate lyase (EC 4.3.2.1) (from data), at 4,599,274 to 4,600,605 _RS18485 CA265_RS18490: CA265_RS18490 - hypothetical protein, at 4,600,636 to 4,600,968 _RS18490 CA265_RS18495: CA265_RS18495 - hypothetical protein, at 4,600,968 to 4,601,189 _RS18495 CA265_RS18500: CA265_RS18500 - N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data), at 4,601,230 to 4,602,297 _RS18500 CA265_RS18505: CA265_RS18505 - pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data), at 4,602,418 to 4,603,227 _RS18505 CA265_RS18510: CA265_RS18510 - acetylglutamate kinase, at 4,603,377 to 4,604,213 _RS18510
Locus Name Description Strand Phenotype
CA265_RS18460 CA265_RS18460 nucleotidyltransferase + insig.
CA265_RS18465 CA265_RS18465 RNA-splicing ligase RtcB + insig.
CA265_RS18470 CA265_RS18470 aminotransferase - insig.
CA265_RS18475 CA265_RS18475 hypothetical protein - insig.
CA265_RS18480 CA265_RS18480 hypothetical protein - no data
CA265_RS18485 CA265_RS18485 arginosuccinate lyase (EC 4.3.2.1) (from data) - strong
CA265_RS18490 CA265_RS18490 hypothetical protein - strong
CA265_RS18495 CA265_RS18495 hypothetical protein - cofit
CA265_RS18500 CA265_RS18500 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) - strong
CA265_RS18505 CA265_RS18505 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) - strong
CA265_RS18510 CA265_RS18510 acetylglutamate kinase - no data

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