Gene info for CA265_RS16075 in Pedobacter sp. GW460-11-11-14-LB5

Updated annotation (from data): Cytidine deaminase (EC 3.5.4.5)
Rationale: Specifically important for utilizing Cytidine. Automated validation from mutant phenotype: the predicted function (CYTIDEAM2-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: cytidine deaminase
Type 1: Protein-coding gene
Located on scaffold NZ_CP021237, - strand, nucleotides 4,034,349 to 4,034,837
See nucleotide sequence around CA265_RS16075 or for all of scaffold NZ_CP021237

Other databases: NCBI, uniprot: A0A1X9Z850

Nearby Genes

500 ntCA265_RS16050 and CA265_RS16055 are separated by 30 nucleotidesCA265_RS16055 and CA265_RS16060 are separated by 455 nucleotidesCA265_RS16060 and CA265_RS16065 are separated by 173 nucleotidesCA265_RS16065 and CA265_RS16070 are separated by 1000 nucleotidesCA265_RS16070 and CA265_RS16075 are separated by 596 nucleotidesCA265_RS16075 and CA265_RS16080 are separated by 148 nucleotidesCA265_RS16080 and CA265_RS16085 overlap by 17 nucleotidesCA265_RS16085 and CA265_RS16090 are separated by 7 nucleotidesCA265_RS16090 and CA265_RS16095 are separated by 155 nucleotidesCA265_RS16095 and CA265_RS16100 are separated by 488 nucleotides CA265_RS16050: CA265_RS16050 - acyl-CoA dehydrogenase, at 4,023,938 to 4,025,026 _RS16050 CA265_RS16055: CA265_RS16055 - hypothetical protein, at 4,025,057 to 4,025,677 _RS16055 CA265_RS16060: CA265_RS16060 - Xaa-Pro dipeptidyl-peptidase, at 4,026,133 to 4,027,995 _RS16060 CA265_RS16065: CA265_RS16065 - DNA topoisomerase IV, at 4,028,169 to 4,031,066 _RS16065 CA265_RS16070: CA265_RS16070 - peptide-N-glycosidase, at 4,032,067 to 4,033,752 _RS16070 CA265_RS16075: CA265_RS16075 - Cytidine deaminase (EC 3.5.4.5) (from data), at 4,034,349 to 4,034,837 _RS16075 CA265_RS16080: CA265_RS16080 - DUF490 domain-containing protein, at 4,034,986 to 4,039,977 _RS16080 CA265_RS16085: CA265_RS16085 - hypothetical protein, at 4,039,961 to 4,042,276 _RS16085 CA265_RS16090: CA265_RS16090 - ribonuclease BN, at 4,042,284 to 4,043,306 _RS16090 CA265_RS16095: CA265_RS16095 - DNA topoisomerase IV, at 4,043,462 to 4,045,333 _RS16095 CA265_RS16100: CA265_RS16100 - serine/threonine protein kinase, at 4,045,822 to 4,047,159 _RS16100
Locus Name Description Strand Phenotype
CA265_RS16050 CA265_RS16050 acyl-CoA dehydrogenase - insig.
CA265_RS16055 CA265_RS16055 hypothetical protein - insig.
CA265_RS16060 CA265_RS16060 Xaa-Pro dipeptidyl-peptidase + insig.
CA265_RS16065 CA265_RS16065 DNA topoisomerase IV - no data
CA265_RS16070 CA265_RS16070 peptide-N-glycosidase - insig.
CA265_RS16075 CA265_RS16075 Cytidine deaminase (EC 3.5.4.5) (from data) - strong
CA265_RS16080 CA265_RS16080 DUF490 domain-containing protein + strong
CA265_RS16085 CA265_RS16085 hypothetical protein + strong
CA265_RS16090 CA265_RS16090 ribonuclease BN + sig.
CA265_RS16095 CA265_RS16095 DNA topoisomerase IV - no data
CA265_RS16100 CA265_RS16100 serine/threonine protein kinase + insig.

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