Gene info for CA265_RS10015 in Pedobacter sp. GW460-11-11-14-LB5

Updated annotation (from data): Nitrate reductase (EC 1.7.99.4)
Rationale: Specifically important for utilizing Sodium nitrate. Automated validation from mutant phenotype: the predicted function (1.7.99.4) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: NAD(P)H-nitrite reductase
Type 1: Protein-coding gene
Located on scaffold NZ_CP021237, + strand, nucleotides 2,461,464 to 2,464,997
See nucleotide sequence around CA265_RS10015 or for all of scaffold NZ_CP021237

Other databases: NCBI, uniprot: A0A1X9Z434

Nearby Genes

500 ntCA265_RS09990 and CA265_RS09995 are separated by 253 nucleotidesCA265_RS09995 and CA265_RS10000 are separated by 37 nucleotidesCA265_RS10000 and CA265_RS10005 are separated by 106 nucleotidesCA265_RS10005 and CA265_RS10010 are separated by 32 nucleotidesCA265_RS10010 and CA265_RS10015 are separated by 53 nucleotidesCA265_RS10015 and CA265_RS10020 are separated by 424 nucleotidesCA265_RS10020 and CA265_RS10025 are separated by 3 nucleotidesCA265_RS10025 and CA265_RS10030 overlap by 6 nucleotidesCA265_RS10030 and CA265_RS10035 are separated by 11 nucleotidesCA265_RS10035 and CA265_RS10040 are separated by 198 nucleotides CA265_RS09990: CA265_RS09990 - uroporphyrinogen-III C-methyltransferase, at 2,455,643 to 2,456,407 _RS09990 CA265_RS09995: CA265_RS09995 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data), at 2,456,661 to 2,459,174 _RS09995 CA265_RS10000: CA265_RS10000 - nitrite reductase small subunit, at 2,459,212 to 2,459,559 _RS10000 CA265_RS10005: CA265_RS10005 - hypothetical protein, at 2,459,666 to 2,460,013 _RS10005 CA265_RS10010: CA265_RS10010 - MFS transporter, at 2,460,046 to 2,461,410 _RS10010 CA265_RS10015: CA265_RS10015 - Nitrate reductase (EC 1.7.99.4) (from data), at 2,461,464 to 2,464,997 _RS10015 CA265_RS10020: CA265_RS10020 - hypothetical protein, at 2,465,422 to 2,465,928 _RS10020 CA265_RS10025: CA265_RS10025 - hypothetical protein, at 2,465,932 to 2,467,413 _RS10025 CA265_RS10030: CA265_RS10030 - hypothetical protein, at 2,467,408 to 2,467,992 _RS10030 CA265_RS10035: CA265_RS10035 - transcriptional regulator, at 2,468,004 to 2,468,687 _RS10035 CA265_RS10040: CA265_RS10040 - hypothetical protein, at 2,468,886 to 2,469,086 _RS10040
Locus Name Description Strand Phenotype
CA265_RS09990 CA265_RS09990 uroporphyrinogen-III C-methyltransferase - sig.
CA265_RS09995 CA265_RS09995 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) + strong
CA265_RS10000 CA265_RS10000 nitrite reductase small subunit + sig.
CA265_RS10005 CA265_RS10005 hypothetical protein + insig.
CA265_RS10010 CA265_RS10010 MFS transporter + sig.
CA265_RS10015 CA265_RS10015 Nitrate reductase (EC 1.7.99.4) (from data) + strong
CA265_RS10020 CA265_RS10020 hypothetical protein + strong
CA265_RS10025 CA265_RS10025 hypothetical protein + cofit
CA265_RS10030 CA265_RS10030 hypothetical protein - strong
CA265_RS10035 CA265_RS10035 transcriptional regulator - strong
CA265_RS10040 CA265_RS10040 hypothetical protein + insig.

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