Gene info for CA265_RS09995 in Pedobacter sp. GW460-11-11-14-LB5

Updated annotation (from data): Nitrite reductase (NAD(P)H) (EC 1.7.1.4)
Rationale: Specifically important for utilizing Sodium nitrate. Automated validation from mutant phenotype: the predicted function (1.7.1.4) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: nitrite reductase (NAD(P)H)
Type 1: Protein-coding gene
Located on scaffold NZ_CP021237, + strand, nucleotides 2,456,661 to 2,459,174
See nucleotide sequence around CA265_RS09995 or for all of scaffold NZ_CP021237

Other databases: NCBI, uniprot: A0A1X9Z4G5

Nearby Genes

500 ntCA265_RS09970 and CA265_RS09975 are separated by 51 nucleotidesCA265_RS09975 and CA265_RS09980 are separated by 31 nucleotidesCA265_RS09980 and CA265_RS09985 are separated by 188 nucleotidesCA265_RS09985 and CA265_RS09990 are separated by 225 nucleotidesCA265_RS09990 and CA265_RS09995 are separated by 253 nucleotidesCA265_RS09995 and CA265_RS10000 are separated by 37 nucleotidesCA265_RS10000 and CA265_RS10005 are separated by 106 nucleotidesCA265_RS10005 and CA265_RS10010 are separated by 32 nucleotidesCA265_RS10010 and CA265_RS10015 are separated by 53 nucleotidesCA265_RS10015 and CA265_RS10020 are separated by 424 nucleotides CA265_RS09970: CA265_RS09970 - hypothetical protein, at 2,451,803 to 2,452,117 _RS09970 CA265_RS09975: CA265_RS09975 - ion transporter, at 2,452,169 to 2,452,993 _RS09975 CA265_RS09980: CA265_RS09980 - NAD(P)-dependent oxidoreductase, at 2,453,025 to 2,453,879 _RS09980 CA265_RS09985: CA265_RS09985 - alpha-L-fucosidase, at 2,454,068 to 2,455,417 _RS09985 CA265_RS09990: CA265_RS09990 - uroporphyrinogen-III C-methyltransferase, at 2,455,643 to 2,456,407 _RS09990 CA265_RS09995: CA265_RS09995 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data), at 2,456,661 to 2,459,174 _RS09995 CA265_RS10000: CA265_RS10000 - nitrite reductase small subunit, at 2,459,212 to 2,459,559 _RS10000 CA265_RS10005: CA265_RS10005 - hypothetical protein, at 2,459,666 to 2,460,013 _RS10005 CA265_RS10010: CA265_RS10010 - MFS transporter, at 2,460,046 to 2,461,410 _RS10010 CA265_RS10015: CA265_RS10015 - Nitrate reductase (EC 1.7.99.4) (from data), at 2,461,464 to 2,464,997 _RS10015 CA265_RS10020: CA265_RS10020 - hypothetical protein, at 2,465,422 to 2,465,928 _RS10020
Locus Name Description Strand Phenotype
CA265_RS09970 CA265_RS09970 hypothetical protein + insig.
CA265_RS09975 CA265_RS09975 ion transporter - insig.
CA265_RS09980 CA265_RS09980 NAD(P)-dependent oxidoreductase - insig.
CA265_RS09985 CA265_RS09985 alpha-L-fucosidase + insig.
CA265_RS09990 CA265_RS09990 uroporphyrinogen-III C-methyltransferase - sig.
CA265_RS09995 CA265_RS09995 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) + strong
CA265_RS10000 CA265_RS10000 nitrite reductase small subunit + sig.
CA265_RS10005 CA265_RS10005 hypothetical protein + insig.
CA265_RS10010 CA265_RS10010 MFS transporter + sig.
CA265_RS10015 CA265_RS10015 Nitrate reductase (EC 1.7.99.4) (from data) + strong
CA265_RS10020 CA265_RS10020 hypothetical protein + strong

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