Gene info for CA265_RS05045 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hydrophobe/amphiphile efflux-1 family RND transporter
Type 1: Protein-coding gene
Located on scaffold NZ_CP021237, + strand, nucleotides 1,197,108 to 1,200,308
See nucleotide sequence around CA265_RS05045 or for all of scaffold NZ_CP021237

Other databases: NCBI, uniprot: A0A1X9Z214

Nearby Genes

500 ntCA265_RS05020 and CA265_RS05025 are separated by 106 nucleotidesCA265_RS05025 and CA265_RS05030 are separated by 386 nucleotidesCA265_RS05030 and CA265_RS05035 are separated by 571 nucleotidesCA265_RS05035 and CA265_RS05040 are separated by 70 nucleotidesCA265_RS05040 and CA265_RS05045 are separated by 24 nucleotidesCA265_RS05045 and CA265_RS05050 overlap by 14 nucleotidesCA265_RS05050 and CA265_RS05055 are separated by 1222 nucleotidesCA265_RS05055 and CA265_RS05060 are separated by 310 nucleotidesCA265_RS05060 and CA265_RS05065 are separated by 137 nucleotidesCA265_RS05065 and CA265_RS05070 are separated by 222 nucleotides CA265_RS05020: CA265_RS05020 - tryptophan synthase subunit beta, at 1,191,748 to 1,192,929 _RS05020 CA265_RS05025: CA265_RS05025 - tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data), at 1,193,036 to 1,193,803 _RS05025 CA265_RS05030: CA265_RS05030 - GNAT family N-acetyltransferase, at 1,194,190 to 1,194,633 _RS05030 CA265_RS05035: CA265_RS05035 - TetR family transcriptional regulator, at 1,195,205 to 1,195,810 _RS05035 CA265_RS05040: CA265_RS05040 - efflux transporter periplasmic adaptor subunit, at 1,195,881 to 1,197,083 _RS05040 CA265_RS05045: CA265_RS05045 - hydrophobe/amphiphile efflux-1 family RND transporter, at 1,197,108 to 1,200,308 _RS05045 CA265_RS05050: CA265_RS05050 - RND transporter, at 1,200,295 to 1,201,701 _RS05050 CA265_RS05055: CA265_RS05055 - hypothetical protein, at 1,202,924 to 1,203,454 _RS05055 CA265_RS05060: CA265_RS05060 - hypothetical protein, at 1,203,765 to 1,204,076 _RS05060 CA265_RS05065: CA265_RS05065 - hypothetical protein, at 1,204,214 to 1,204,447 _RS05065 CA265_RS05070: CA265_RS05070 - Na+/H+ antiporter NhaA, at 1,204,670 to 1,205,824 _RS05070
Locus Name Description Strand Phenotype
CA265_RS05020 CA265_RS05020 tryptophan synthase subunit beta + no data
CA265_RS05025 CA265_RS05025 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) + no data
CA265_RS05030 CA265_RS05030 GNAT family N-acetyltransferase - insig.
CA265_RS05035 CA265_RS05035 TetR family transcriptional regulator + strong
CA265_RS05040 CA265_RS05040 efflux transporter periplasmic adaptor subunit + strong
CA265_RS05045 CA265_RS05045 hydrophobe/amphiphile efflux-1 family RND transporter + strong
CA265_RS05050 CA265_RS05050 RND transporter + sig.
CA265_RS05055 CA265_RS05055 hypothetical protein + insig.
CA265_RS05060 CA265_RS05060 hypothetical protein - sig.
CA265_RS05065 CA265_RS05065 hypothetical protein + sig.
CA265_RS05070 CA265_RS05070 Na+/H+ antiporter NhaA - strong

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