Gene info for BPHYT_RS34245 in Burkholderia phytofirmans PsJN

Updated annotation (from data): ABC transporter for L-rhamnose/L-fucose/xylitol, ATPase component
Rationale: Specifically important for utilizing L-rhamnose, L-fucose, and xylitol.
Original annotation: multidrug ABC transporter ATP-binding protein
Type 1: Protein-coding gene
Located on scaffold NC_010676, - strand, nucleotides 3,284,317 to 3,285,849
See nucleotide sequence around BPHYT_RS34245 or for all of scaffold NC_010676

Other databases: NCBI, uniprot: B2T9V9

Nearby Genes

500 ntBPHYT_RS34220 and BPHYT_RS34225 are separated by 7 nucleotidesBPHYT_RS34225 and BPHYT_RS34230 are separated by 105 nucleotidesBPHYT_RS34230 and BPHYT_RS34235 are separated by 66 nucleotidesBPHYT_RS34235 and BPHYT_RS34240 are separated by 25 nucleotidesBPHYT_RS34240 and BPHYT_RS34245 overlap by 11 nucleotidesBPHYT_RS34245 and BPHYT_RS34250 overlap by 4 nucleotidesBPHYT_RS34250 and BPHYT_RS34255 are separated by 273 nucleotidesBPHYT_RS34255 and BPHYT_RS34260 are separated by 131 nucleotidesBPHYT_RS34260 and BPHYT_RS34265 are separated by 123 nucleotidesBPHYT_RS34265 and BPHYT_RS34270 are separated by 391 nucleotides BPHYT_RS34220: BPHYT_RS34220 - L-fucono-1,5-lactonase (from data), at 3,279,568 to 3,280,398 _RS34220 BPHYT_RS34225: BPHYT_RS34225 - L-fucose dehydrogenase (EC 1.1.1.122) (from data), at 3,280,406 to 3,281,446 _RS34225 BPHYT_RS34230: BPHYT_RS34230 - L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data), at 3,281,552 to 3,282,847 _RS34230 BPHYT_RS34235: BPHYT_RS34235 - putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data), at 3,282,914 to 3,283,246 _RS34235 BPHYT_RS34240: BPHYT_RS34240 - ABC transporter for L-rhamnose/L-fucose/xylitol, permease component (from data), at 3,283,272 to 3,284,327 _RS34240 BPHYT_RS34245: BPHYT_RS34245 - ABC transporter for L-rhamnose/L-fucose/xylitol, ATPase component (from data), at 3,284,317 to 3,285,849 _RS34245 BPHYT_RS34250: BPHYT_RS34250 - ABC transporter for L-rhamnose/L-fucose/xylitol, substrate-binding component (from data), at 3,285,846 to 3,286,895 _RS34250 BPHYT_RS34255: BPHYT_RS34255 - IclR family transcriptional regulator, at 3,287,169 to 3,287,957 _RS34255 BPHYT_RS34260: BPHYT_RS34260 - hypothetical protein, at 3,288,089 to 3,288,634 _RS34260 BPHYT_RS34265: BPHYT_RS34265 - N-acetyltransferase GCN5, at 3,288,758 to 3,291,262 _RS34265 BPHYT_RS34270: BPHYT_RS34270 - LysR family transcriptional regulator, at 3,291,654 to 3,292,529 _RS34270
Locus Name Description Strand Phenotype
BPHYT_RS34220 BPHYT_RS34220 L-fucono-1,5-lactonase (from data) - sig.
BPHYT_RS34225 BPHYT_RS34225 L-fucose dehydrogenase (EC 1.1.1.122) (from data) - strong
BPHYT_RS34230 BPHYT_RS34230 L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data) - strong
BPHYT_RS34235 BPHYT_RS34235 putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data) - insig.
BPHYT_RS34240 BPHYT_RS34240 ABC transporter for L-rhamnose/L-fucose/xylitol, permease component (from data) - sig.
BPHYT_RS34245 BPHYT_RS34245 ABC transporter for L-rhamnose/L-fucose/xylitol, ATPase component (from data) - strong
BPHYT_RS34250 BPHYT_RS34250 ABC transporter for L-rhamnose/L-fucose/xylitol, substrate-binding component (from data) - strong
BPHYT_RS34255 BPHYT_RS34255 IclR family transcriptional regulator + insig.
BPHYT_RS34260 BPHYT_RS34260 hypothetical protein + insig.
BPHYT_RS34265 BPHYT_RS34265 N-acetyltransferase GCN5 - insig.
BPHYT_RS34270 BPHYT_RS34270 LysR family transcriptional regulator + strong

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