Gene info for BPHYT_RS25810 in Burkholderia phytofirmans PsJN

Updated annotation (from data): acetaldehyde dehydrogenase (EC 1.2.1.3)
Rationale: Specifically important in carbon source 2-Deoxy-D-Ribose. Acetaldehyde is expected to be produced by the deoxyribose 5-phosphate aldolase.
Original annotation: aldehyde dehydrogenase
Type 1: Protein-coding gene
Located on scaffold NC_010676, - strand, nucleotides 1,363,169 to 1,365,559
See nucleotide sequence around BPHYT_RS25810 or for all of scaffold NC_010676

Other databases: NCBI, uniprot: B2TCY0

Nearby Genes

500 ntBPHYT_RS25785 and BPHYT_RS25790 are separated by 15 nucleotidesBPHYT_RS25790 and BPHYT_RS25795 are separated by 146 nucleotidesBPHYT_RS25795 and BPHYT_RS25800 are separated by 95 nucleotidesBPHYT_RS25800 and BPHYT_RS25805 are separated by 39 nucleotidesBPHYT_RS25805 and BPHYT_RS25810 are separated by 182 nucleotidesBPHYT_RS25810 and BPHYT_RS25815 are separated by 16 nucleotidesBPHYT_RS25815 and BPHYT_RS25820 are separated by 252 nucleotidesBPHYT_RS25820 and BPHYT_RS25825 overlap by 4 nucleotidesBPHYT_RS25825 and BPHYT_RS25830 are separated by 67 nucleotidesBPHYT_RS25830 and BPHYT_RS25835 are separated by 433 nucleotides BPHYT_RS25785: BPHYT_RS25785 - sugar ABC transporter permease, at 1,357,079 to 1,358,137 _RS25785 BPHYT_RS25790: BPHYT_RS25790 - sugar ABC transporter ATP-binding protein, at 1,358,153 to 1,359,655 _RS25790 BPHYT_RS25795: BPHYT_RS25795 - LacI family transcription regulator, at 1,359,802 to 1,360,806 _RS25795 BPHYT_RS25800: BPHYT_RS25800 - sugar ABC transporter permease, at 1,360,902 to 1,361,960 _RS25800 BPHYT_RS25805: BPHYT_RS25805 - deoxyribose kinase (EC 2.7.1.15) (from data), at 1,362,000 to 1,362,986 _RS25805 BPHYT_RS25810: BPHYT_RS25810 - acetaldehyde dehydrogenase (EC 1.2.1.3) (from data), at 1,363,169 to 1,365,559 _RS25810 BPHYT_RS25815: BPHYT_RS25815 - deoxyribose-phosphate aldolase, at 1,365,576 to 1,366,586 _RS25815 BPHYT_RS25820: BPHYT_RS25820 - sugar ABC transporter, at 1,366,839 to 1,368,461 _RS25820 BPHYT_RS25825: BPHYT_RS25825 - ABC transporter permease, at 1,368,458 to 1,369,459 _RS25825 BPHYT_RS25830: BPHYT_RS25830 - sugar ABC transporter substrate-binding protein, at 1,369,527 to 1,370,672 _RS25830 BPHYT_RS25835: BPHYT_RS25835 - hypothetical protein, at 1,371,106 to 1,371,393 _RS25835
Locus Name Description Strand Phenotype
BPHYT_RS25785 BPHYT_RS25785 sugar ABC transporter permease - strong
BPHYT_RS25790 BPHYT_RS25790 sugar ABC transporter ATP-binding protein - no data
BPHYT_RS25795 BPHYT_RS25795 LacI family transcription regulator - no data
BPHYT_RS25800 BPHYT_RS25800 sugar ABC transporter permease - strong
BPHYT_RS25805 BPHYT_RS25805 deoxyribose kinase (EC 2.7.1.15) (from data) - strong
BPHYT_RS25810 BPHYT_RS25810 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) - strong
BPHYT_RS25815 BPHYT_RS25815 deoxyribose-phosphate aldolase - insig.
BPHYT_RS25820 BPHYT_RS25820 sugar ABC transporter + insig.
BPHYT_RS25825 BPHYT_RS25825 ABC transporter permease + insig.
BPHYT_RS25830 BPHYT_RS25830 sugar ABC transporter substrate-binding protein + insig.
BPHYT_RS25835 BPHYT_RS25835 hypothetical protein - no data

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