Gene info for BPHYT_RS17685 in Burkholderia phytofirmans PsJN

Updated annotation (from data): 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00007.
Original annotation: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Type 1: Protein-coding gene
Located on scaffold NC_010681, - strand, nucleotides 3,996,480 to 3,997,232
See nucleotide sequence around BPHYT_RS17685 or for all of scaffold NC_010681

Other databases: NCBI, uniprot: B2SZ60

Nearby Genes

500 ntBPHYT_RS17660 and BPHYT_RS17665 are separated by 81 nucleotidesBPHYT_RS17665 and BPHYT_RS17670 are separated by 94 nucleotidesBPHYT_RS17670 and BPHYT_RS17675 overlap by 4 nucleotidesBPHYT_RS17675 and BPHYT_RS17680 are separated by 4 nucleotidesBPHYT_RS17680 and BPHYT_RS17685 are separated by 237 nucleotidesBPHYT_RS17685 and BPHYT_RS17690 are separated by 229 nucleotidesBPHYT_RS17690 and BPHYT_RS17695 overlap by 4 nucleotidesBPHYT_RS17695 and BPHYT_RS17700 are separated by 79 nucleotidesBPHYT_RS17700 and BPHYT_RS17705 are separated by 113 nucleotidesBPHYT_RS17705 and BPHYT_RS17710 are separated by 168 nucleotides BPHYT_RS17660: BPHYT_RS17660 - HIT family hydrolase, at 3,993,728 to 3,994,093 _RS17660 BPHYT_RS17665: BPHYT_RS17665 - membrane protein, at 3,994,175 to 3,994,570 _RS17665 BPHYT_RS17670: BPHYT_RS17670 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data), at 3,994,665 to 3,995,060 _RS17670 BPHYT_RS17675: BPHYT_RS17675 - phosphoribosyl-AMP cyclohydrolase, at 3,995,057 to 3,995,464 _RS17675 BPHYT_RS17680: BPHYT_RS17680 - imidazole glycerol phosphate synthase subunit HisF, at 3,995,469 to 3,996,242 _RS17680 BPHYT_RS17685: BPHYT_RS17685 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data), at 3,996,480 to 3,997,232 _RS17685 BPHYT_RS17690: BPHYT_RS17690 - imidazole glycerol phosphate synthase, at 3,997,462 to 3,998,103 _RS17690 BPHYT_RS17695: BPHYT_RS17695 - membrane protein, at 3,998,100 to 3,998,720 _RS17695 BPHYT_RS17700: BPHYT_RS17700 - imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data), at 3,998,800 to 3,999,387 _RS17700 BPHYT_RS17705: BPHYT_RS17705 - histidinol-phosphate aminotransferase, at 3,999,501 to 4,000,571 _RS17705 BPHYT_RS17710: BPHYT_RS17710 - histidinol dehydrogenase, at 4,000,740 to 4,002,062 _RS17710
Locus Name Description Strand Phenotype
BPHYT_RS17660 BPHYT_RS17660 HIT family hydrolase - insig.
BPHYT_RS17665 BPHYT_RS17665 membrane protein - insig.
BPHYT_RS17670 BPHYT_RS17670 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) - strong
BPHYT_RS17675 BPHYT_RS17675 phosphoribosyl-AMP cyclohydrolase - cofit
BPHYT_RS17680 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF - strong
BPHYT_RS17685 BPHYT_RS17685 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) - strong
BPHYT_RS17690 BPHYT_RS17690 imidazole glycerol phosphate synthase - strong
BPHYT_RS17695 BPHYT_RS17695 membrane protein - insig.
BPHYT_RS17700 BPHYT_RS17700 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) - strong
BPHYT_RS17705 BPHYT_RS17705 histidinol-phosphate aminotransferase - sig.
BPHYT_RS17710 BPHYT_RS17710 histidinol dehydrogenase - no data

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