Gene info for BPHYT_RS16950 in Burkholderia phytofirmans PsJN

Updated annotation (from data): 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58)
Rationale: specifically important for D-galactose utilization
Original annotation: 2-dehydro-3-deoxygalactonokinase
Type 1: Protein-coding gene
Located on scaffold NC_010681, - strand, nucleotides 3,843,047 to 3,844,099
See nucleotide sequence around BPHYT_RS16950 or for all of scaffold NC_010681

Other databases: NCBI, uniprot: B2SYR9

Nearby Genes

500 ntBPHYT_RS16925 and BPHYT_RS16930 are separated by 54 nucleotidesBPHYT_RS16930 and BPHYT_RS16935 are separated by 133 nucleotidesBPHYT_RS16935 and BPHYT_RS16940 are separated by 130 nucleotidesBPHYT_RS16940 and BPHYT_RS16945 overlap by 4 nucleotidesBPHYT_RS16945 and BPHYT_RS16950 are separated by 36 nucleotidesBPHYT_RS16950 and BPHYT_RS16955 overlap by 4 nucleotidesBPHYT_RS16955 and BPHYT_RS16960 are separated by 1097 nucleotidesBPHYT_RS16960 and BPHYT_RS16965 are separated by 399 nucleotidesBPHYT_RS16965 and BPHYT_RS16970 are separated by 144 nucleotidesBPHYT_RS16970 and BPHYT_RS16975 are separated by 48 nucleotides BPHYT_RS16925: BPHYT_RS16925 - D-galactose ABC transporter, permease component (from data), at 3,837,685 to 3,838,701 _RS16925 BPHYT_RS16930: BPHYT_RS16930 - D-galactose ABC transporter, ATPase component (from data), at 3,838,756 to 3,840,294 _RS16930 BPHYT_RS16935: BPHYT_RS16935 - D-galactose ABC transporter, substrate-binding component (from data), at 3,840,428 to 3,841,426 _RS16935 BPHYT_RS16940: BPHYT_RS16940 - short-chain dehydrogenase, at 3,841,557 to 3,842,333 _RS16940 BPHYT_RS16945: BPHYT_RS16945 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 3,842,330 to 3,843,010 _RS16945 BPHYT_RS16950: BPHYT_RS16950 - 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) (from data), at 3,843,047 to 3,844,099 _RS16950 BPHYT_RS16955: BPHYT_RS16955 - IclR family transcriptional regulator, at 3,844,096 to 3,845,088 _RS16955 BPHYT_RS16960: BPHYT_RS16960 - hypothetical protein, at 3,846,186 to 3,846,638 _RS16960 BPHYT_RS16965: BPHYT_RS16965 - transposase, at 3,847,038 to 3,848,315 _RS16965 BPHYT_RS16970: BPHYT_RS16970 - monofunctional biosynthetic peptidoglycan transglycosylase, at 3,848,460 to 3,849,182 _RS16970 BPHYT_RS16975: BPHYT_RS16975 - shikimate 5-dehydrogenase, at 3,849,231 to 3,850,094 _RS16975
Locus Name Description Strand Phenotype
BPHYT_RS16925 BPHYT_RS16925 D-galactose ABC transporter, permease component (from data) - sig.
BPHYT_RS16930 BPHYT_RS16930 D-galactose ABC transporter, ATPase component (from data) - strong
BPHYT_RS16935 BPHYT_RS16935 D-galactose ABC transporter, substrate-binding component (from data) - strong
BPHYT_RS16940 BPHYT_RS16940 short-chain dehydrogenase - strong
BPHYT_RS16945 BPHYT_RS16945 2-dehydro-3-deoxy-6-phosphogalactonate aldolase - strong
BPHYT_RS16950 BPHYT_RS16950 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) (from data) - strong
BPHYT_RS16955 BPHYT_RS16955 IclR family transcriptional regulator - strong
BPHYT_RS16960 BPHYT_RS16960 hypothetical protein + sig.
BPHYT_RS16965 BPHYT_RS16965 transposase + no data
BPHYT_RS16970 BPHYT_RS16970 monofunctional biosynthetic peptidoglycan transglycosylase - insig.
BPHYT_RS16975 BPHYT_RS16975 shikimate 5-dehydrogenase - strong

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