Gene info for BPHYT_RS16925 in Burkholderia phytofirmans PsJN

Updated annotation (from data): D-galactose ABC transporter, permease component
Rationale: Specifically important for D-galactose utilization
Original annotation: arabinose ABC transporter permease
Type 1: Protein-coding gene
Located on scaffold NC_010681, - strand, nucleotides 3,837,685 to 3,838,701
See nucleotide sequence around BPHYT_RS16925 or for all of scaffold NC_010681

Other databases: NCBI, uniprot: B2SYR4

Nearby Genes

500 ntBPHYT_RS16900 and BPHYT_RS16905 are separated by 130 nucleotidesBPHYT_RS16905 and BPHYT_RS16910 are separated by 247 nucleotidesBPHYT_RS16910 and BPHYT_RS16915 are separated by 233 nucleotidesBPHYT_RS16915 and BPHYT_RS16920 overlap by 4 nucleotidesBPHYT_RS16920 and BPHYT_RS16925 are separated by 39 nucleotidesBPHYT_RS16925 and BPHYT_RS16930 are separated by 54 nucleotidesBPHYT_RS16930 and BPHYT_RS16935 are separated by 133 nucleotidesBPHYT_RS16935 and BPHYT_RS16940 are separated by 130 nucleotidesBPHYT_RS16940 and BPHYT_RS16945 overlap by 4 nucleotidesBPHYT_RS16945 and BPHYT_RS16950 are separated by 36 nucleotides BPHYT_RS16900: BPHYT_RS16900 - hypothetical protein, at 3,832,939 to 3,833,457 _RS16900 BPHYT_RS16905: BPHYT_RS16905 - orotidine 5'-phosphate decarboxylase, at 3,833,588 to 3,834,403 _RS16905 BPHYT_RS16910: BPHYT_RS16910 - aldose 1-epimerase, at 3,834,651 to 3,835,712 _RS16910 BPHYT_RS16915: BPHYT_RS16915 - L-arabinono-1,4-lactonase; galactonolactonase (from data), at 3,835,946 to 3,836,848 _RS16915 BPHYT_RS16920: BPHYT_RS16920 - L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data), at 3,836,845 to 3,837,645 _RS16920 BPHYT_RS16925: BPHYT_RS16925 - D-galactose ABC transporter, permease component (from data), at 3,837,685 to 3,838,701 _RS16925 BPHYT_RS16930: BPHYT_RS16930 - D-galactose ABC transporter, ATPase component (from data), at 3,838,756 to 3,840,294 _RS16930 BPHYT_RS16935: BPHYT_RS16935 - D-galactose ABC transporter, substrate-binding component (from data), at 3,840,428 to 3,841,426 _RS16935 BPHYT_RS16940: BPHYT_RS16940 - short-chain dehydrogenase, at 3,841,557 to 3,842,333 _RS16940 BPHYT_RS16945: BPHYT_RS16945 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 3,842,330 to 3,843,010 _RS16945 BPHYT_RS16950: BPHYT_RS16950 - 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) (from data), at 3,843,047 to 3,844,099 _RS16950
Locus Name Description Strand Phenotype
BPHYT_RS16900 BPHYT_RS16900 hypothetical protein + insig.
BPHYT_RS16905 BPHYT_RS16905 orotidine 5'-phosphate decarboxylase - strong
BPHYT_RS16910 BPHYT_RS16910 aldose 1-epimerase - insig.
BPHYT_RS16915 BPHYT_RS16915 L-arabinono-1,4-lactonase; galactonolactonase (from data) - strong
BPHYT_RS16920 BPHYT_RS16920 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) - strong
BPHYT_RS16925 BPHYT_RS16925 D-galactose ABC transporter, permease component (from data) - sig.
BPHYT_RS16930 BPHYT_RS16930 D-galactose ABC transporter, ATPase component (from data) - strong
BPHYT_RS16935 BPHYT_RS16935 D-galactose ABC transporter, substrate-binding component (from data) - strong
BPHYT_RS16940 BPHYT_RS16940 short-chain dehydrogenase - strong
BPHYT_RS16945 BPHYT_RS16945 2-dehydro-3-deoxy-6-phosphogalactonate aldolase - strong
BPHYT_RS16950 BPHYT_RS16950 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) (from data) - strong

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