Gene info for BPHYT_RS16285 in Burkholderia phytofirmans PsJN

Updated annotation (from data): Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Rationale: Specifically important for utilizing L-Isoleucine. Automated validation from mutant phenotype: the predicted function (BRANCHED-CHAINAMINOTRANSFERILEU-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: branched-chain amino acid aminotransferase
Type 1: Protein-coding gene
Located on scaffold NC_010681, + strand, nucleotides 3,697,139 to 3,698,062
See nucleotide sequence around BPHYT_RS16285 or for all of scaffold NC_010681

Other databases: NCBI, uniprot: B2SYD6

Nearby Genes

500 ntBPHYT_RS16260 and BPHYT_RS16265 are separated by 280 nucleotidesBPHYT_RS16265 and BPHYT_RS16270 are separated by 460 nucleotidesBPHYT_RS16270 and BPHYT_RS16275 are separated by 271 nucleotidesBPHYT_RS16275 and BPHYT_RS16280 overlap by 4 nucleotidesBPHYT_RS16280 and BPHYT_RS16285 are separated by 220 nucleotidesBPHYT_RS16285 and BPHYT_RS16290 are separated by 62 nucleotidesBPHYT_RS16290 and BPHYT_RS16295 are separated by 169 nucleotidesBPHYT_RS16295 and BPHYT_RS16300 are separated by 167 nucleotidesBPHYT_RS16300 and BPHYT_RS16305 are separated by 165 nucleotidesBPHYT_RS16305 and BPHYT_RS16310 overlap by 8 nucleotides BPHYT_RS16260: BPHYT_RS16260 - fructose-bisphosphate aldolase, at 3,691,145 to 3,692,209 _RS16260 BPHYT_RS16265: BPHYT_RS16265 - hypothetical protein, at 3,692,490 to 3,693,926 _RS16265 BPHYT_RS16270: BPHYT_RS16270 - phosphoglycerate kinase, at 3,694,387 to 3,695,580 _RS16270 BPHYT_RS16275: BPHYT_RS16275 - branched-chain amino acid transporter, at 3,695,852 to 3,696,175 _RS16275 BPHYT_RS16280: BPHYT_RS16280 - branched-chain amino acid ABC transporter permease, at 3,696,172 to 3,696,918 _RS16280 BPHYT_RS16285: BPHYT_RS16285 - Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data), at 3,697,139 to 3,698,062 _RS16285 BPHYT_RS16290: BPHYT_RS16290 - hypothetical protein, at 3,698,125 to 3,698,319 _RS16290 BPHYT_RS16295: BPHYT_RS16295 - ADP-heptose--LPS heptosyltransferase, at 3,698,489 to 3,699,514 _RS16295 BPHYT_RS16300: BPHYT_RS16300 - hypothetical protein, at 3,699,682 to 3,700,128 _RS16300 BPHYT_RS16305: BPHYT_RS16305 - alpha/beta hydrolase, at 3,700,294 to 3,701,286 _RS16305 BPHYT_RS16310: BPHYT_RS16310 - hypothetical protein, at 3,701,279 to 3,701,866 _RS16310
Locus Name Description Strand Phenotype
BPHYT_RS16260 BPHYT_RS16260 fructose-bisphosphate aldolase - no data
BPHYT_RS16265 BPHYT_RS16265 hypothetical protein - sig.
BPHYT_RS16270 BPHYT_RS16270 phosphoglycerate kinase - strong
BPHYT_RS16275 BPHYT_RS16275 branched-chain amino acid transporter - insig.
BPHYT_RS16280 BPHYT_RS16280 branched-chain amino acid ABC transporter permease - sig.
BPHYT_RS16285 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) + strong
BPHYT_RS16290 BPHYT_RS16290 hypothetical protein + insig.
BPHYT_RS16295 BPHYT_RS16295 ADP-heptose--LPS heptosyltransferase + no data
BPHYT_RS16300 BPHYT_RS16300 hypothetical protein + sig.
BPHYT_RS16305 BPHYT_RS16305 alpha/beta hydrolase + insig.
BPHYT_RS16310 BPHYT_RS16310 hypothetical protein + insig.

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