Gene info for BPHYT_RS13920 in Burkholderia phytofirmans PsJN

Updated annotation (from data): Myo-inosose-2 dehydratase (EC 4.2.1.44)
Rationale: Specifically important for utilizing m-Inositol. Automated validation from mutant phenotype: the predicted function (MYO-INOSOSE-2-DEHYDRATASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: xylose isomerase
Type 1: Protein-coding gene
Located on scaffold NC_010681, + strand, nucleotides 3,179,210 to 3,180,127
See nucleotide sequence around BPHYT_RS13920 or for all of scaffold NC_010681

Other databases: NCBI, uniprot: B2SZL7

Nearby Genes

500 ntBPHYT_RS13895 and BPHYT_RS13900 are separated by 147 nucleotidesBPHYT_RS13900 and BPHYT_RS13905 are separated by 103 nucleotidesBPHYT_RS13905 and BPHYT_RS13910 are separated by 64 nucleotidesBPHYT_RS13910 and BPHYT_RS13915 overlap by 4 nucleotidesBPHYT_RS13915 and BPHYT_RS13920 are separated by 10 nucleotidesBPHYT_RS13920 and BPHYT_RS13925 overlap by 4 nucleotidesBPHYT_RS13925 and BPHYT_RS13930 are separated by 41 nucleotidesBPHYT_RS13930 and BPHYT_RS13935 are separated by 391 nucleotidesBPHYT_RS13935 and BPHYT_RS13940 overlap by 4 nucleotidesBPHYT_RS13940 and BPHYT_RS13945 are separated by 160 nucleotides BPHYT_RS13895: BPHYT_RS13895 - sugar ABC transporter substrate-binding protein, at 3,171,888 to 3,172,934 _RS13895 BPHYT_RS13900: BPHYT_RS13900 - ATPase, at 3,173,082 to 3,174,239 _RS13900 BPHYT_RS13905: BPHYT_RS13905 - ABC transporter ATP-binding protein, at 3,174,343 to 3,175,119 _RS13905 BPHYT_RS13910: BPHYT_RS13910 - 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) (from data), at 3,175,184 to 3,177,229 _RS13910 BPHYT_RS13915: BPHYT_RS13915 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, at 3,177,226 to 3,179,199 _RS13915 BPHYT_RS13920: BPHYT_RS13920 - Myo-inosose-2 dehydratase (EC 4.2.1.44) (from data), at 3,179,210 to 3,180,127 _RS13920 BPHYT_RS13925: BPHYT_RS13925 - 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data), at 3,180,124 to 3,180,924 _RS13925 BPHYT_RS13930: BPHYT_RS13930 - hypothetical protein, at 3,180,966 to 3,183,323 _RS13930 BPHYT_RS13935: BPHYT_RS13935 - mannosyltransferase, at 3,183,715 to 3,184,428 _RS13935 BPHYT_RS13940: BPHYT_RS13940 - ABC transporter, at 3,184,425 to 3,185,177 _RS13940 BPHYT_RS13945: BPHYT_RS13945 - branched-chain amino acid ABC transporter permease, at 3,185,338 to 3,186,630 _RS13945
Locus Name Description Strand Phenotype
BPHYT_RS13895 BPHYT_RS13895 sugar ABC transporter substrate-binding protein + insig.
BPHYT_RS13900 BPHYT_RS13900 ATPase + insig.
BPHYT_RS13905 BPHYT_RS13905 ABC transporter ATP-binding protein + no data
BPHYT_RS13910 BPHYT_RS13910 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) (from data) + strong
BPHYT_RS13915 BPHYT_RS13915 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase + insig.
BPHYT_RS13920 BPHYT_RS13920 Myo-inosose-2 dehydratase (EC 4.2.1.44) (from data) + strong
BPHYT_RS13925 BPHYT_RS13925 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) + strong
BPHYT_RS13930 BPHYT_RS13930 hypothetical protein - insig.
BPHYT_RS13935 BPHYT_RS13935 mannosyltransferase - insig.
BPHYT_RS13940 BPHYT_RS13940 ABC transporter - insig.
BPHYT_RS13945 BPHYT_RS13945 branched-chain amino acid ABC transporter permease - no data

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