Gene info for BPHYT_RS13540 in Burkholderia phytofirmans PsJN

Annotation: LysR family transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NC_010681, - strand, nucleotides 3,088,029 to 3,088,937
See nucleotide sequence around BPHYT_RS13540 or for all of scaffold NC_010681

Other databases: NCBI, uniprot: B2SY50

Nearby Genes

500 ntBPHYT_RS13515 and BPHYT_RS13520 overlap by 4 nucleotidesBPHYT_RS13520 and BPHYT_RS13525 are separated by 17 nucleotidesBPHYT_RS13525 and BPHYT_RS13530 are separated by 94 nucleotidesBPHYT_RS13530 and BPHYT_RS13535 are separated by 12 nucleotidesBPHYT_RS13535 and BPHYT_RS13540 are separated by 62 nucleotidesBPHYT_RS13540 and BPHYT_RS13545 are separated by 142 nucleotidesBPHYT_RS13545 and BPHYT_RS13550 are separated by 85 nucleotidesBPHYT_RS13550 and BPHYT_RS13555 are separated by 13 nucleotidesBPHYT_RS13555 and BPHYT_RS13560 are separated by 121 nucleotidesBPHYT_RS13560 and BPHYT_RS13565 are separated by 123 nucleotides BPHYT_RS13515: BPHYT_RS13515 - 3-isopropylmalate dehydratase small subunit, at 3,083,846 to 3,084,457 _RS13515 BPHYT_RS13520: BPHYT_RS13520 - isopropylmalate isomerase, at 3,084,454 to 3,085,869 _RS13520 BPHYT_RS13525: BPHYT_RS13525 - alpha/beta hydrolase, at 3,085,887 to 3,086,765 _RS13525 BPHYT_RS13530: BPHYT_RS13530 - LysR family transcriptional regulator, at 3,086,860 to 3,087,762 _RS13530 BPHYT_RS13535: BPHYT_RS13535 - hypothetical protein, at 3,087,775 to 3,087,966 _RS13535 BPHYT_RS13540: BPHYT_RS13540 - LysR family transcriptional regulator, at 3,088,029 to 3,088,937 _RS13540 BPHYT_RS13545: BPHYT_RS13545 - 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) (from data), at 3,089,080 to 3,091,200 _RS13545 BPHYT_RS13550: BPHYT_RS13550 - acyl-CoA dehydrogenase, at 3,091,286 to 3,092,494 _RS13550 BPHYT_RS13555: BPHYT_RS13555 - acyl-CoA dehydrogenase, at 3,092,508 to 3,093,635 _RS13555 BPHYT_RS13560: BPHYT_RS13560 - MarR family transcriptional regulator, at 3,093,757 to 3,094,179 _RS13560 BPHYT_RS13565: BPHYT_RS13565 - bacterioferritin, at 3,094,303 to 3,094,779 _RS13565
Locus Name Description Strand Phenotype
BPHYT_RS13515 BPHYT_RS13515 3-isopropylmalate dehydratase small subunit - insig.
BPHYT_RS13520 BPHYT_RS13520 isopropylmalate isomerase - insig.
BPHYT_RS13525 BPHYT_RS13525 alpha/beta hydrolase - no data
BPHYT_RS13530 BPHYT_RS13530 LysR family transcriptional regulator + no data
BPHYT_RS13535 BPHYT_RS13535 hypothetical protein - no data
BPHYT_RS13540 BPHYT_RS13540 LysR family transcriptional regulator - strong
BPHYT_RS13545 BPHYT_RS13545 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) (from data) + strong
BPHYT_RS13550 BPHYT_RS13550 acyl-CoA dehydrogenase + sig.
BPHYT_RS13555 BPHYT_RS13555 acyl-CoA dehydrogenase + insig.
BPHYT_RS13560 BPHYT_RS13560 MarR family transcriptional regulator + no data
BPHYT_RS13565 BPHYT_RS13565 bacterioferritin - insig.

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