Gene info for BPHYT_RS07555 in Burkholderia phytofirmans PsJN

Updated annotation (from data): Histidine ammonia-lyase (EC 4.3.1.3)
Rationale: Specifically important for utilizing L-Histidine. Automated validation from mutant phenotype: the predicted function (HISTIDINE-AMMONIA-LYASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: histidine ammonia-lyase
Type 1: Protein-coding gene
Located on scaffold NC_010681, + strand, nucleotides 1,717,210 to 1,718,730
See nucleotide sequence around BPHYT_RS07555 or for all of scaffold NC_010681

Other databases: NCBI, uniprot: B2T2Y2

Nearby Genes

500 ntBPHYT_RS07530 and BPHYT_RS07535 are separated by 47 nucleotidesBPHYT_RS07535 and BPHYT_RS07540 are separated by 100 nucleotidesBPHYT_RS07540 and BPHYT_RS07545 are separated by 192 nucleotidesBPHYT_RS07545 and BPHYT_RS07550 are separated by 106 nucleotidesBPHYT_RS07550 and BPHYT_RS07555 are separated by 386 nucleotidesBPHYT_RS07555 and BPHYT_RS07560 are separated by 25 nucleotidesBPHYT_RS07560 and BPHYT_RS07565 are separated by 62 nucleotidesBPHYT_RS07565 and BPHYT_RS07570 are separated by 17 nucleotidesBPHYT_RS07570 and BPHYT_RS07575 are separated by 85 nucleotidesBPHYT_RS07575 and BPHYT_RS07580 are separated by 8 nucleotides BPHYT_RS07530: BPHYT_RS07530 - ATPase, at 1,713,208 to 1,713,636 _RS07530 BPHYT_RS07535: BPHYT_RS07535 - hypothetical protein, at 1,713,684 to 1,714,421 _RS07535 BPHYT_RS07540: BPHYT_RS07540 - hypothetical protein, at 1,714,522 to 1,714,704 _RS07540 BPHYT_RS07545: BPHYT_RS07545 - epimerase, at 1,714,897 to 1,715,820 _RS07545 BPHYT_RS07550: BPHYT_RS07550 - LysR family transcriptional regulator, at 1,715,927 to 1,716,823 _RS07550 BPHYT_RS07555: BPHYT_RS07555 - Histidine ammonia-lyase (EC 4.3.1.3) (from data), at 1,717,210 to 1,718,730 _RS07555 BPHYT_RS07560: BPHYT_RS07560 - histidine utilization repressor, at 1,718,756 to 1,719,451 _RS07560 BPHYT_RS07565: BPHYT_RS07565 - urocanate hydratase, at 1,719,514 to 1,721,202 _RS07565 BPHYT_RS07570: BPHYT_RS07570 - hypothetical protein, at 1,721,220 to 1,721,846 _RS07570 BPHYT_RS07575: BPHYT_RS07575 - imidazolonepropionase, at 1,721,932 to 1,723,155 _RS07575 BPHYT_RS07580: BPHYT_RS07580 - N-formimino-L-glutamate deiminase, at 1,723,164 to 1,724,570 _RS07580
Locus Name Description Strand Phenotype
BPHYT_RS07530 BPHYT_RS07530 ATPase + no data
BPHYT_RS07535 BPHYT_RS07535 hypothetical protein + insig.
BPHYT_RS07540 BPHYT_RS07540 hypothetical protein - insig.
BPHYT_RS07545 BPHYT_RS07545 epimerase - insig.
BPHYT_RS07550 BPHYT_RS07550 LysR family transcriptional regulator + no data
BPHYT_RS07555 BPHYT_RS07555 Histidine ammonia-lyase (EC 4.3.1.3) (from data) + strong
BPHYT_RS07560 BPHYT_RS07560 histidine utilization repressor + no data
BPHYT_RS07565 BPHYT_RS07565 urocanate hydratase + strong
BPHYT_RS07570 BPHYT_RS07570 hypothetical protein + insig.
BPHYT_RS07575 BPHYT_RS07575 imidazolonepropionase + sig.
BPHYT_RS07580 BPHYT_RS07580 N-formimino-L-glutamate deiminase + sig.

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