Gene info for BPHYT_RS03220 in Burkholderia phytofirmans PsJN

Updated annotation (from data): Acyl-CoA dehydrogenase (EC 1.3.8.7)
Rationale: Specifically important for: Tween 20; Trisodium citrate dihydrate. Tween 20 hydrolyzes to a mix of C12, C14, and C16 fatty acids; this is probably part of beta oxidation. The phenotype on citrate is milder and is not explained, but it is conserved. (SEED_correct)
Original annotation: acyl-CoA dehydrogenase
Type 1: Protein-coding gene
Located on scaffold NC_010681, + strand, nucleotides 721,553 to 723,340
See nucleotide sequence around BPHYT_RS03220 or for all of scaffold NC_010681

Other databases: NCBI, uniprot: B2SX46

Nearby Genes

500 ntBPHYT_RS03195 and BPHYT_RS03200 are separated by 63 nucleotidesBPHYT_RS03200 and BPHYT_RS03205 are separated by 181 nucleotidesBPHYT_RS03205 and BPHYT_RS03210 overlap by 4 nucleotidesBPHYT_RS03210 and BPHYT_RS03215 are separated by 837 nucleotidesBPHYT_RS03215 and BPHYT_RS03220 are separated by 98 nucleotidesBPHYT_RS03220 and BPHYT_RS03225 are separated by 128 nucleotidesBPHYT_RS03225 and BPHYT_RS03230 are separated by 189 nucleotidesBPHYT_RS03230 and BPHYT_RS03235 are separated by 118 nucleotidesBPHYT_RS03235 and BPHYT_RS03240 are separated by 140 nucleotidesBPHYT_RS03240 and BPHYT_RS03245 are separated by 148 nucleotides BPHYT_RS03195: BPHYT_RS03195 - membrane protein, at 715,548 to 716,201 _RS03195 BPHYT_RS03200: BPHYT_RS03200 - aspartate--tRNA(Asp/Asn) ligase, at 716,265 to 718,064 _RS03200 BPHYT_RS03205: BPHYT_RS03205 - dihydroneopterin triphosphate pyrophosphatase, at 718,246 to 718,761 _RS03205 BPHYT_RS03210: BPHYT_RS03210 - cardiolipin synthetase, at 718,758 to 720,017 _RS03210 BPHYT_RS03215: BPHYT_RS03215 - TetR family transcriptional regulator, at 720,855 to 721,454 _RS03215 BPHYT_RS03220: BPHYT_RS03220 - Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data), at 721,553 to 723,340 _RS03220 BPHYT_RS03225: BPHYT_RS03225 - 3-hydroxyacyl-CoA dehydrogenase, at 723,469 to 725,904 _RS03225 BPHYT_RS03230: BPHYT_RS03230 - acetyl-CoA acetyltransferase, at 726,094 to 727,293 _RS03230 BPHYT_RS03235: BPHYT_RS03235 - enoyl-CoA hydratase, at 727,412 to 728,182 _RS03235 BPHYT_RS03240: BPHYT_RS03240 - formate dehydrogenase accessory protein FdhD, at 728,323 to 729,162 _RS03240 BPHYT_RS03245: BPHYT_RS03245 - hypothetical protein, at 729,311 to 729,787 _RS03245
Locus Name Description Strand Phenotype
BPHYT_RS03195 BPHYT_RS03195 membrane protein + sig.
BPHYT_RS03200 BPHYT_RS03200 aspartate--tRNA(Asp/Asn) ligase + no data
BPHYT_RS03205 BPHYT_RS03205 dihydroneopterin triphosphate pyrophosphatase + insig.
BPHYT_RS03210 BPHYT_RS03210 cardiolipin synthetase + sig.
BPHYT_RS03215 BPHYT_RS03215 TetR family transcriptional regulator + strong
BPHYT_RS03220 BPHYT_RS03220 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) + strong
BPHYT_RS03225 BPHYT_RS03225 3-hydroxyacyl-CoA dehydrogenase + sig.
BPHYT_RS03230 BPHYT_RS03230 acetyl-CoA acetyltransferase + insig.
BPHYT_RS03235 BPHYT_RS03235 enoyl-CoA hydratase + insig.
BPHYT_RS03240 BPHYT_RS03240 formate dehydrogenase accessory protein FdhD - sig.
BPHYT_RS03245 BPHYT_RS03245 hypothetical protein + insig.

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