Gene info for AZOBR_RS15920 in Azospirillum brasilense Sp245

Updated annotation (from data): Large component of TRAP-type D-gluconate transporter
Rationale: specific phenotype on D-gluconic acid and cofit with other components nearby; 56% identical to SMa0250 of S. meliloti, which is required for gluconate utilization (PMCid:PMC2631997). Also is 56% identical to Atu2743 of A. tumefaciens, which takes up galacturonate (PMCid:PMC4751846), so this might also be a galacturonate transporter (we did not study galacturonate utilizaton in this organism)
Original annotation: dehydroascorbate transporter
Type 1: Protein-coding gene
Located on scaffold NC_016594.1, - strand, nucleotides 325,239 to 326,519
See nucleotide sequence around AZOBR_RS15920 or for all of scaffold NC_016594.1

Other databases: NCBI, uniprot: G8AR25

Nearby Genes

500 ntAZOBR_RS15895 and AZOBR_RS15900 are separated by 172 nucleotidesAZOBR_RS15900 and AZOBR_RS15905 are separated by 156 nucleotidesAZOBR_RS15905 and AZOBR_RS15910 are separated by 32 nucleotidesAZOBR_RS15910 and AZOBR_RS15915 are separated by 164 nucleotidesAZOBR_RS15915 and AZOBR_RS15920 are separated by 30 nucleotidesAZOBR_RS15920 and AZOBR_RS15925 are separated by 82 nucleotidesAZOBR_RS15925 and AZOBR_RS15930 are separated by 458 nucleotidesAZOBR_RS15930 and AZOBR_RS15935 are separated by 309 nucleotidesAZOBR_RS15935 and AZOBR_RS15940 overlap by 20 nucleotidesAZOBR_RS15940 and AZOBR_RS15945 are separated by 25 nucleotides AZOBR_RS15895: AZOBR_RS15895 - hypothetical protein, at 320,854 to 321,075 _RS15895 AZOBR_RS15900: AZOBR_RS15900 - hypothetical protein, at 321,248 to 321,706 _RS15900 AZOBR_RS15905: AZOBR_RS15905 - 2-hydroxyhepta-2 4-diene-1 7-dioate isomerase, at 321,863 to 322,714 _RS15905 AZOBR_RS15910: AZOBR_RS15910 - hypothetical protein, at 322,747 to 324,030 _RS15910 AZOBR_RS15915: AZOBR_RS15915 - gluconate TRAP transporter, periplasmic solute-binding component (from data), at 324,195 to 325,208 _RS15915 AZOBR_RS15920: AZOBR_RS15920 - Large component of TRAP-type D-gluconate transporter (from data), at 325,239 to 326,519 _RS15920 AZOBR_RS15925: AZOBR_RS15925 - gluconate TRAP transporter, small permease component (from data), at 326,602 to 327,093 _RS15925 AZOBR_RS15930: AZOBR_RS15930 - transcriptional regulator, at 327,552 to 328,394 _RS15930 AZOBR_RS15935: AZOBR_RS15935 - tRNA-dihydrouridine synthase A, at 328,704 to 329,693 _RS15935 AZOBR_RS15940: AZOBR_RS15940 - hypothetical protein, at 329,674 to 330,111 _RS15940 AZOBR_RS15945: AZOBR_RS15945 - glutathione peroxidase, at 330,137 to 330,745 _RS15945
Locus Name Description Strand Phenotype
AZOBR_RS15895 AZOBR_RS15895 hypothetical protein - insig.
AZOBR_RS15900 AZOBR_RS15900 hypothetical protein - insig.
AZOBR_RS15905 AZOBR_RS15905 2-hydroxyhepta-2 4-diene-1 7-dioate isomerase + insig.
AZOBR_RS15910 AZOBR_RS15910 hypothetical protein + insig.
AZOBR_RS15915 AZOBR_RS15915 gluconate TRAP transporter, periplasmic solute-binding component (from data) - strong
AZOBR_RS15920 AZOBR_RS15920 Large component of TRAP-type D-gluconate transporter (from data) - strong
AZOBR_RS15925 AZOBR_RS15925 gluconate TRAP transporter, small permease component (from data) - strong
AZOBR_RS15930 AZOBR_RS15930 transcriptional regulator + no data
AZOBR_RS15935 AZOBR_RS15935 tRNA-dihydrouridine synthase A + insig.
AZOBR_RS15940 AZOBR_RS15940 hypothetical protein - sig.
AZOBR_RS15945 AZOBR_RS15945 glutathione peroxidase - insig.

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