Gene info for AO356_24585 in Pseudomonas fluorescens FW300-N2C3

Updated annotation (from data): L-arabonate dehydratase (EC 4.2.1.25)
Rationale: Specifically important for: L-Arabinose. L-arabonate is an intermediate in the oxidation of L-arabinose (SEED_correct)
Original annotation: dihydroxy-acid dehydratase
Type 1: Protein-coding gene
Located on scaffold CP012831, - strand, nucleotides 5,558,025 to 5,559,761
See nucleotide sequence around AO356_24585 or for all of scaffold CP012831

Other databases: NCBI, uniprot: A0A0N9WWL3

Nearby Genes

500 ntAO356_24560 and AO356_24565 are separated by 370 nucleotidesAO356_24565 and AO356_24570 are separated by 43 nucleotidesAO356_24570 and AO356_24575 are separated by 169 nucleotidesAO356_24575 and AO356_24580 are separated by 248 nucleotidesAO356_24580 and AO356_24585 are separated by 251 nucleotidesAO356_24585 and AO356_24590 are separated by 193 nucleotidesAO356_24590 and AO356_24595 are separated by 149 nucleotidesAO356_24595 and AO356_24600 are separated by 12 nucleotidesAO356_24600 and AO356_24605 are separated by 237 nucleotidesAO356_24605 and AO356_24610 overlap by 14 nucleotides AO356_24560: AO356_24560 - aminopeptidase, at 5,545,448 to 5,548,105 _24560 AO356_24565: AO356_24565 - hypothetical protein, at 5,548,476 to 5,549,528 _24565 AO356_24570: AO356_24570 - RND transporter, at 5,549,572 to 5,551,947 _24570 AO356_24575: AO356_24575 - hypothetical protein, at 5,552,117 to 5,556,805 _24575 AO356_24580: AO356_24580 - GntR family transcriptional regulator, at 5,557,054 to 5,557,773 _24580 AO356_24585: AO356_24585 - L-arabonate dehydratase (EC 4.2.1.25) (from data), at 5,558,025 to 5,559,761 _24585 AO356_24590: AO356_24590 - MFS transporter, at 5,559,955 to 5,561,277 _24590 AO356_24595: AO356_24595 - 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) (from data), at 5,561,427 to 5,562,419 _24595 AO356_24600: AO356_24600 - ketoglutarate semialdehyde dehydrogenase, at 5,562,432 to 5,564,012 _24600 AO356_24605: AO356_24605 - hypothetical protein, at 5,564,250 to 5,564,546 _24605 AO356_24610: AO356_24610 - 3-carboxymuconate cyclase, at 5,564,533 to 5,565,708 _24610
Locus Name Description Strand Phenotype
AO356_24560 AO356_24560 aminopeptidase + insig.
AO356_24565 AO356_24565 hypothetical protein + insig.
AO356_24570 AO356_24570 RND transporter + insig.
AO356_24575 AO356_24575 hypothetical protein - insig.
AO356_24580 AO356_24580 GntR family transcriptional regulator - strong
AO356_24585 AO356_24585 L-arabonate dehydratase (EC 4.2.1.25) (from data) - strong
AO356_24590 AO356_24590 MFS transporter + strong
AO356_24595 AO356_24595 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) (from data) + strong
AO356_24600 AO356_24600 ketoglutarate semialdehyde dehydrogenase + insig.
AO356_24605 AO356_24605 hypothetical protein + no data
AO356_24610 AO356_24610 3-carboxymuconate cyclase + insig.

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