Gene info for AO356_23085 in Pseudomonas fluorescens FW300-N2C3

Updated annotation (from data): Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2)
Rationale: Specifically important for utilizing Cytosine. Automated validation from mutant phenotype: the predicted function (1.3.1.2) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: dihydropyrimidine dehydrogenase
Type 1: Protein-coding gene
Located on scaffold CP012831, - strand, nucleotides 5,165,485 to 5,166,759
See nucleotide sequence around AO356_23085 or for all of scaffold CP012831

Other databases: NCBI, uniprot: A0A0N9X2W6

Nearby Genes

500 ntAO356_23060 and AO356_23065 are separated by 42 nucleotidesAO356_23065 and AO356_23070 are separated by 145 nucleotidesAO356_23070 and AO356_23075 are separated by 793 nucleotidesAO356_23075 and AO356_23080 are separated by 266 nucleotidesAO356_23080 and AO356_23085 are separated by 143 nucleotidesAO356_23085 and AO356_23090 are separated by 0 nucleotidesAO356_23090 and AO356_23095 are separated by 181 nucleotidesAO356_23095 and AO356_23100 are separated by 609 nucleotidesAO356_23100 and AO356_23105 are separated by 151 nucleotidesAO356_23105 and AO356_23110 are separated by 118 nucleotides AO356_23060: AO356_23060 - gluconolactonase, at 5,160,109 to 5,161,014 _23060 AO356_23065: AO356_23065 - NAD-dependent dehydratase, at 5,161,057 to 5,161,878 _23065 AO356_23070: AO356_23070 - porin, at 5,162,024 to 5,163,325 _23070 AO356_23075: AO356_23075 - hypothetical protein, at 5,164,119 to 5,164,454 _23075 AO356_23080: AO356_23080 - TetR family transcriptional regulator, at 5,164,721 to 5,165,341 _23080 AO356_23085: AO356_23085 - Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data), at 5,165,485 to 5,166,759 _23085 AO356_23090: AO356_23090 - dihydropyrimidine dehydrogenase, at 5,166,760 to 5,168,127 _23090 AO356_23095: AO356_23095 - Dihydropyrimidinase (EC 3.5.2.2) (from data), at 5,168,309 to 5,169,748 _23095 AO356_23100: AO356_23100 - nitrate reductase, at 5,170,358 to 5,171,836 _23100 AO356_23105: AO356_23105 - Beta-ureidopropionase (EC 3.5.1.6) (from data), at 5,171,988 to 5,173,271 _23105 AO356_23110: AO356_23110 - LuxR family transcriptional regulator, at 5,173,390 to 5,174,874 _23110
Locus Name Description Strand Phenotype
AO356_23060 AO356_23060 gluconolactonase - insig.
AO356_23065 AO356_23065 NAD-dependent dehydratase - insig.
AO356_23070 AO356_23070 porin - no data
AO356_23075 AO356_23075 hypothetical protein + insig.
AO356_23080 AO356_23080 TetR family transcriptional regulator + insig.
AO356_23085 AO356_23085 Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) - strong
AO356_23090 AO356_23090 dihydropyrimidine dehydrogenase - sig.
AO356_23095 AO356_23095 Dihydropyrimidinase (EC 3.5.2.2) (from data) - strong
AO356_23100 AO356_23100 nitrate reductase + strong
AO356_23105 AO356_23105 Beta-ureidopropionase (EC 3.5.1.6) (from data) + strong
AO356_23110 AO356_23110 LuxR family transcriptional regulator + insig.

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