Gene info for AO356_13810 in Pseudomonas fluorescens FW300-N2C3

Updated annotation (from data): ABC transporter for Carnitine, permease component
Rationale: Specific phenotypes on Carnitine Hydrochloride; Carnitine Hydrochloride.
Original annotation: choline ABC transporter permease subunit
Type 1: Protein-coding gene
Located on scaffold CP012831, - strand, nucleotides 3,133,764 to 3,134,609
See nucleotide sequence around AO356_13810 or for all of scaffold CP012831

Other databases: NCBI, uniprot: A0A0N9WI93

Nearby Genes

500 ntAO356_13785 and AO356_13790 are separated by 370 nucleotidesAO356_13790 and AO356_13795 are separated by 147 nucleotidesAO356_13795 and AO356_13800 are separated by 79 nucleotidesAO356_13800 and AO356_13805 are separated by 310 nucleotidesAO356_13805 and AO356_13810 overlap by 4 nucleotidesAO356_13810 and AO356_13815 are separated by 71 nucleotidesAO356_13815 and AO356_13820 are separated by 425 nucleotidesAO356_13820 and AO356_13825 are separated by 617 nucleotidesAO356_13825 and AO356_13830 are separated by 118 nucleotidesAO356_13830 and AO356_13835 are separated by 382 nucleotides AO356_13785: AO356_13785 - peptidase C69, at 3,126,442 to 3,127,884 _13785 AO356_13790: AO356_13790 - choline dehydrogenase, at 3,128,255 to 3,129,958 _13790 AO356_13795: AO356_13795 - betaine-aldehyde dehydrogenase, at 3,130,106 to 3,131,578 _13795 AO356_13800: AO356_13800 - transcriptional repressor BetI, at 3,131,658 to 3,132,278 _13800 AO356_13805: AO356_13805 - ABC transporter for Carnitine, ATPase component (from data), at 3,132,589 to 3,133,767 _13805 AO356_13810: AO356_13810 - ABC transporter for Carnitine, permease component (from data), at 3,133,764 to 3,134,609 _13810 AO356_13815: AO356_13815 - ABC transporter for Carnitine, periplasmic substrate-binding component 1 (from data), at 3,134,681 to 3,135,628 _13815 AO356_13820: AO356_13820 - serine dehydratase, at 3,136,054 to 3,137,430 _13820 AO356_13825: AO356_13825 - AraC family transcriptional regulator, at 3,138,048 to 3,139,151 _13825 AO356_13830: AO356_13830 - hypothetical protein, at 3,139,270 to 3,139,533 _13830 AO356_13835: AO356_13835 - gamma-butyrobetaine dioxygenase, at 3,139,916 to 3,141,079 _13835
Locus Name Description Strand Phenotype
AO356_13785 AO356_13785 peptidase C69 - insig.
AO356_13790 AO356_13790 choline dehydrogenase - strong
AO356_13795 AO356_13795 betaine-aldehyde dehydrogenase - insig.
AO356_13800 AO356_13800 transcriptional repressor BetI - sig.
AO356_13805 AO356_13805 ABC transporter for Carnitine, ATPase component (from data) - strong
AO356_13810 AO356_13810 ABC transporter for Carnitine, permease component (from data) - strong
AO356_13815 AO356_13815 ABC transporter for Carnitine, periplasmic substrate-binding component 1 (from data) - strong
AO356_13820 AO356_13820 serine dehydratase + sig.
AO356_13825 AO356_13825 AraC family transcriptional regulator + strong
AO356_13830 AO356_13830 hypothetical protein - insig.
AO356_13835 AO356_13835 gamma-butyrobetaine dioxygenase - insig.

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