Gene info for AO353_21385 in Pseudomonas fluorescens FW300-N2E3

Updated annotation (from data): m-Inositol ABC transporter, ATPase component (itaA)
Rationale: Specific phenotype on m-Inositol and 63% identical to SMb20173 or itaA, which also has this function (see PMC2597717). The periplasmic substrate-binding component (AO353_21380) is not included in this table because it was annotated correclty in both resources. SEED_correct
Original annotation: D-ribose transporter ATP-binding protein
Type 1: Protein-coding gene
Located on scaffold CP012830, + strand, nucleotides 4,682,065 to 4,683,630
See nucleotide sequence around AO353_21385 or for all of scaffold CP012830

Other databases: NCBI, uniprot: A0A0N9WNW1

Nearby Genes

500 ntAO353_21360 and AO353_21365 are separated by 34 nucleotidesAO353_21365 and AO353_21370 are separated by 116 nucleotidesAO353_21370 and AO353_21375 are separated by 212 nucleotidesAO353_21375 and AO353_21380 are separated by 354 nucleotidesAO353_21380 and AO353_21385 are separated by 70 nucleotidesAO353_21385 and AO353_21390 are separated by 176 nucleotidesAO353_21390 and AO353_21395 are separated by 165 nucleotidesAO353_21395 and AO353_21400 are separated by 325 nucleotidesAO353_21400 and AO353_21405 are separated by 214 nucleotidesAO353_21405 and AO353_21410 are separated by 135 nucleotides AO353_21360: AO353_21360 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data), at 4,675,495 to 4,677,426 _21360 AO353_21365: AO353_21365 - Inositol 2-dehydrogenase (EC 1.1.1.18) (from data), at 4,677,461 to 4,678,471 _21365 AO353_21370: AO353_21370 - protein iolH, at 4,678,588 to 4,679,448 _21370 AO353_21375: AO353_21375 - oxidoreductase, at 4,679,661 to 4,680,713 _21375 AO353_21380: AO353_21380 - rhizopine-binding protein, at 4,681,068 to 4,681,994 _21380 AO353_21385: AO353_21385 - m-Inositol ABC transporter, ATPase component (itaA) (from data), at 4,682,065 to 4,683,630 _21385 AO353_21390: AO353_21390 - m-Inositol ABC transporter, permease component (iatP) (from data), at 4,683,807 to 4,684,829 _21390 AO353_21395: AO353_21395 - porin, at 4,684,995 to 4,686,344 _21395 AO353_21400: AO353_21400 - conjugal transfer protein TraR, at 4,686,670 to 4,687,074 _21400 AO353_21405: AO353_21405 - chemotaxis protein, at 4,687,289 to 4,688,899 _21405 AO353_21410: AO353_21410 - hypothetical protein, at 4,689,035 to 4,689,238 _21410
Locus Name Description Strand Phenotype
AO353_21360 AO353_21360 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data) + strong
AO353_21365 AO353_21365 Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) + strong
AO353_21370 AO353_21370 protein iolH + insig.
AO353_21375 AO353_21375 oxidoreductase + insig.
AO353_21380 AO353_21380 rhizopine-binding protein + strong
AO353_21385 AO353_21385 m-Inositol ABC transporter, ATPase component (itaA) (from data) + strong
AO353_21390 AO353_21390 m-Inositol ABC transporter, permease component (iatP) (from data) + strong
AO353_21395 AO353_21395 porin + insig.
AO353_21400 AO353_21400 conjugal transfer protein TraR + strong
AO353_21405 AO353_21405 chemotaxis protein + insig.
AO353_21410 AO353_21410 hypothetical protein + insig.

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