Gene info for AO353_12085 in Pseudomonas fluorescens FW300-N2E3

Updated annotation (from data): 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00007.
Original annotation: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Type 1: Protein-coding gene
Located on scaffold CP012830, + strand, nucleotides 2,655,878 to 2,656,615
See nucleotide sequence around AO353_12085 or for all of scaffold CP012830

Other databases: NCBI, uniprot: A0A0N9W5M4

Nearby Genes

500 ntAO353_12060 and AO353_12065 are separated by 272 nucleotidesAO353_12065 and AO353_12070 are separated by 238 nucleotidesAO353_12070 and AO353_12075 overlap by 1 nucleotidesAO353_12075 and AO353_12080 overlap by 1 nucleotidesAO353_12080 and AO353_12085 are separated by 42 nucleotidesAO353_12085 and AO353_12090 are separated by 9 nucleotidesAO353_12090 and AO353_12095 are separated by 66 nucleotidesAO353_12095 and AO353_12100 are separated by 164 nucleotidesAO353_12100 and AO353_12105 are separated by 1 nucleotidesAO353_12105 and AO353_12110 are separated by 34 nucleotides AO353_12060: AO353_12060 - acetyltransferase, at 2,651,776 to 2,652,174 _12060 AO353_12065: AO353_12065 - MFS transporter, at 2,652,447 to 2,654,108 _12065 AO353_12070: AO353_12070 - imidazoleglycerol-phosphate dehydratase, at 2,654,347 to 2,654,940 _12070 AO353_12075: AO353_12075 - imidazole glycerol phosphate synthase subunit HisH, at 2,654,940 to 2,655,578 _12075 AO353_12080: AO353_12080 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, at 2,655,578 to 2,655,835 _12080 AO353_12085: AO353_12085 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data), at 2,655,878 to 2,656,615 _12085 AO353_12090: AO353_12090 - imidazole glycerol phosphate synthase subunit HisF, at 2,656,625 to 2,657,395 _12090 AO353_12095: AO353_12095 - amino acid ABC transporter substrate-binding protein, at 2,657,462 to 2,658,217 _12095 AO353_12100: AO353_12100 - polysaccharide deacetylase, at 2,658,382 to 2,659,161 _12100 AO353_12105: AO353_12105 - peptidase S41, at 2,659,163 to 2,660,482 _12105 AO353_12110: AO353_12110 - peptidase M23, at 2,660,517 to 2,661,812 _12110
Locus Name Description Strand Phenotype
AO353_12060 AO353_12060 acetyltransferase - sig.
AO353_12065 AO353_12065 MFS transporter + sig.
AO353_12070 AO353_12070 imidazoleglycerol-phosphate dehydratase + strong
AO353_12075 AO353_12075 imidazole glycerol phosphate synthase subunit HisH + strong
AO353_12080 AO353_12080 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase + sig.
AO353_12085 AO353_12085 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) + strong
AO353_12090 AO353_12090 imidazole glycerol phosphate synthase subunit HisF + cofit
AO353_12095 AO353_12095 amino acid ABC transporter substrate-binding protein + sig.
AO353_12100 AO353_12100 polysaccharide deacetylase - sig.
AO353_12105 AO353_12105 peptidase S41 - strong
AO353_12110 AO353_12110 peptidase M23 - strong

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