Gene info for AO353_07790 in Pseudomonas fluorescens FW300-N2E3

Updated annotation (from data): ABC transporter for Carnitine, ATPase component
Rationale: Specific phenotypes on Carnitine Hydrochloride. Note that both carnitine and choline are catabolized via glycine betaine and this is clustered with glycine betaine degradation genes. This ABC transporter might also transport choline or glycine betaine with a different SBP (AO353_07780).
Original annotation: choline ABC transporter ATP-binding protein
Type 1: Protein-coding gene
Located on scaffold CP012830, + strand, nucleotides 1,715,983 to 1,717,161
See nucleotide sequence around AO353_07790 or for all of scaffold CP012830

Other databases: NCBI, uniprot: A0A0N9WA42

Nearby Genes

500 ntAO353_07765 and AO353_07770 are separated by 152 nucleotidesAO353_07770 and AO353_07775 are separated by 446 nucleotidesAO353_07775 and AO353_07780 are separated by 431 nucleotidesAO353_07780 and AO353_07785 are separated by 66 nucleotidesAO353_07785 and AO353_07790 overlap by 4 nucleotidesAO353_07790 and AO353_07795 are separated by 267 nucleotidesAO353_07795 and AO353_07800 are separated by 426 nucleotidesAO353_07800 and AO353_07805 are separated by 96 nucleotidesAO353_07805 and AO353_07810 are separated by 214 nucleotidesAO353_07810 and AO353_07815 are separated by 185 nucleotides AO353_07765: AO353_07765 - hypothetical protein, at 1,710,350 to 1,710,613 _07765 AO353_07770: AO353_07770 - AraC family transcriptional regulator, at 1,710,766 to 1,711,869 _07770 AO353_07775: AO353_07775 - serine dehydratase, at 1,712,316 to 1,713,692 _07775 AO353_07780: AO353_07780 - Carnitine ABC transporter, substrate-binding component CaiX (from data), at 1,714,124 to 1,715,074 _07780 AO353_07785: AO353_07785 - ABC transporter for Carnitine, permease component (from data), at 1,715,141 to 1,715,986 _07785 AO353_07790: AO353_07790 - ABC transporter for Carnitine, ATPase component (from data), at 1,715,983 to 1,717,161 _07790 AO353_07795: AO353_07795 - beta-aspartyl peptidase, at 1,717,429 to 1,719,426 _07795 AO353_07800: AO353_07800 - transcriptional repressor BetI, at 1,719,853 to 1,720,458 _07800 AO353_07805: AO353_07805 - betaine-aldehyde dehydrogenase, at 1,720,555 to 1,722,027 _07805 AO353_07810: AO353_07810 - choline dehydrogenase, at 1,722,242 to 1,723,945 _07810 AO353_07815: AO353_07815 - hypothetical protein, at 1,724,131 to 1,725,114 _07815
Locus Name Description Strand Phenotype
AO353_07765 AO353_07765 hypothetical protein + insig.
AO353_07770 AO353_07770 AraC family transcriptional regulator - strong
AO353_07775 AO353_07775 serine dehydratase - insig.
AO353_07780 AO353_07780 Carnitine ABC transporter, substrate-binding component CaiX (from data) + strong
AO353_07785 AO353_07785 ABC transporter for Carnitine, permease component (from data) + strong
AO353_07790 AO353_07790 ABC transporter for Carnitine, ATPase component (from data) + strong
AO353_07795 AO353_07795 beta-aspartyl peptidase - strong
AO353_07800 AO353_07800 transcriptional repressor BetI + strong
AO353_07805 AO353_07805 betaine-aldehyde dehydrogenase + strong
AO353_07810 AO353_07810 choline dehydrogenase + strong
AO353_07815 AO353_07815 hypothetical protein + insig.

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