Gene info for AO353_05485 in Pseudomonas fluorescens FW300-N2E3

Updated annotation (from data): Fructose-specific PTS system, I, HPr, and IIA components
Rationale: Specifically important for fructose utilization. The enzyme II B/C components of this PTS system are in AO353_05475 which is cofit and is correctly annotated. AO353_05485 is 73% identical to PA3562, which is also part of a fructose-specific system (PMC:PMC2542419)
Original annotation: PTS fructose transporter subunit IIA
Type 1: Protein-coding gene
Located on scaffold CP012830, - strand, nucleotides 1,212,536 to 1,215,397
See nucleotide sequence around AO353_05485 or for all of scaffold CP012830

Other databases: NCBI, uniprot: A0A0N9W2F2

Nearby Genes

500 ntAO353_05460 and AO353_05465 are separated by 146 nucleotidesAO353_05465 and AO353_05470 are separated by 90 nucleotidesAO353_05470 and AO353_05475 are separated by 260 nucleotidesAO353_05475 and AO353_05480 are separated by 11 nucleotidesAO353_05480 and AO353_05485 overlap by 1 nucleotidesAO353_05485 and AO353_05490 are separated by 307 nucleotidesAO353_05490 and AO353_05495 are separated by 3 nucleotidesAO353_05495 and AO353_05500 are separated by 142 nucleotidesAO353_05500 and AO353_05505 are separated by 313 nucleotidesAO353_05505 and AO353_05510 overlap by 4 nucleotides AO353_05460: AO353_05460 - ligand-gated channel protein, at 1,202,943 to 1,205,273 _05460 AO353_05465: AO353_05465 - flavodoxin, at 1,205,420 to 1,207,951 _05465 AO353_05470: AO353_05470 - alkaline phosphatase, at 1,208,042 to 1,209,583 _05470 AO353_05475: AO353_05475 - PTS fructose transporter subunit IIBC, at 1,209,844 to 1,211,583 _05475 AO353_05480: AO353_05480 - 1-phosphofructokinase, at 1,211,595 to 1,212,536 _05480 AO353_05485: AO353_05485 - Fructose-specific PTS system, I, HPr, and IIA components (from data), at 1,212,536 to 1,215,397 _05485 AO353_05490: AO353_05490 - transcriptional regulator, at 1,215,705 to 1,216,700 _05490 AO353_05495: AO353_05495 - hydrolase TatD, at 1,216,704 to 1,217,480 _05495 AO353_05500: AO353_05500 - chemotaxis protein, at 1,217,623 to 1,219,653 _05500 AO353_05505: AO353_05505 - hypothetical protein, at 1,219,967 to 1,220,803 _05505 AO353_05510: AO353_05510 - N-acetyl-anhydromuranmyl-L-alanine amidase, at 1,220,800 to 1,221,360 _05510
Locus Name Description Strand Phenotype
AO353_05460 AO353_05460 ligand-gated channel protein + insig.
AO353_05465 AO353_05465 flavodoxin + cofit
AO353_05470 AO353_05470 alkaline phosphatase - insig.
AO353_05475 AO353_05475 PTS fructose transporter subunit IIBC - strong
AO353_05480 AO353_05480 1-phosphofructokinase - no data
AO353_05485 AO353_05485 Fructose-specific PTS system, I, HPr, and IIA components (from data) - strong
AO353_05490 AO353_05490 transcriptional regulator + strong
AO353_05495 AO353_05495 hydrolase TatD + insig.
AO353_05500 AO353_05500 chemotaxis protein - insig.
AO353_05505 AO353_05505 hypothetical protein - sig.
AO353_05510 AO353_05510 N-acetyl-anhydromuranmyl-L-alanine amidase - strong

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