Gene info for ABZR86_RS16985 in Dyella japonica UNC79MFTsu3.2

Updated annotation (from data): Alpha-amylase (EC 3.2.1.1)
Rationale: Specifically important for utilizing a-Cyclodextrin. Automated validation from mutant phenotype: the predicted function (3.2.1.1) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: alpha-amylase family glycosyl hydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JBFBVS010000001, + strand, nucleotides 3,834,537 to 3,836,117
See nucleotide sequence around ABZR86_RS16985 or for all of scaffold NZ_JBFBVS010000001

Other databases: NCBI, other: N515DRAFT_3391, uniprot: A0A1I2HSP4

Nearby Genes

500 ntABZR86_RS16960 and ABZR86_RS16965 are separated by 130 nucleotidesABZR86_RS16965 and ABZR86_RS16970 are separated by 261 nucleotidesABZR86_RS16970 and ABZR86_RS16975 are separated by 69 nucleotidesABZR86_RS16975 and ABZR86_RS16980 are separated by 450 nucleotidesABZR86_RS16980 and ABZR86_RS16985 are separated by 220 nucleotidesABZR86_RS16985 and ABZR86_RS16990 are separated by 47 nucleotidesABZR86_RS16990 and ABZR86_RS16995 are separated by 201 nucleotidesABZR86_RS16995 and ABZR86_RS17000 are separated by 72 nucleotidesABZR86_RS17000 and ABZR86_RS17005 overlap by 4 nucleotidesABZR86_RS17005 and ABZR86_RS17010 are separated by 97 nucleotides ABZR86_RS16960: ABZR86_RS16960 - hypothetical protein, at 3,826,108 to 3,826,443 _RS16960 ABZR86_RS16965: ABZR86_RS16965 - DNA helicase II, at 3,826,574 to 3,828,799 _RS16965 ABZR86_RS16970: ABZR86_RS16970 - hypothetical protein, at 3,829,061 to 3,829,279 _RS16970 ABZR86_RS16975: ABZR86_RS16975 - alpha-glucosidase, at 3,829,349 to 3,830,974 _RS16975 ABZR86_RS16980: ABZR86_RS16980 - TonB-dependent receptor, at 3,831,425 to 3,834,316 _RS16980 ABZR86_RS16985: ABZR86_RS16985 - Alpha-amylase (EC 3.2.1.1) (from data), at 3,834,537 to 3,836,117 _RS16985 ABZR86_RS16990: ABZR86_RS16990 - TIM-barrel domain-containing protein, at 3,836,165 to 3,838,441 _RS16990 ABZR86_RS16995: ABZR86_RS16995 - glycoside hydrolase family 13 protein, at 3,838,643 to 3,840,664 _RS16995 ABZR86_RS17000: ABZR86_RS17000 - Six-hairpin glycosidase-like protein, at 3,840,737 to 3,842,899 _RS17000 ABZR86_RS17005: ABZR86_RS17005 - MFS transporter, at 3,842,896 to 3,844,389 _RS17005 ABZR86_RS17010: ABZR86_RS17010 - LacI family DNA-binding transcriptional regulator, at 3,844,487 to 3,845,521 _RS17010
Locus Name Description Strand Phenotype
ABZR86_RS16960 ABZR86_RS16960 hypothetical protein - insig.
ABZR86_RS16965 ABZR86_RS16965 DNA helicase II + strong
ABZR86_RS16970 ABZR86_RS16970 hypothetical protein - insig.
ABZR86_RS16975 ABZR86_RS16975 alpha-glucosidase - insig.
ABZR86_RS16980 ABZR86_RS16980 TonB-dependent receptor + strong
ABZR86_RS16985 ABZR86_RS16985 Alpha-amylase (EC 3.2.1.1) (from data) + strong
ABZR86_RS16990 ABZR86_RS16990 TIM-barrel domain-containing protein + insig.
ABZR86_RS16995 ABZR86_RS16995 glycoside hydrolase family 13 protein + insig.
ABZR86_RS17000 ABZR86_RS17000 Six-hairpin glycosidase-like protein + insig.
ABZR86_RS17005 ABZR86_RS17005 MFS transporter + strong
ABZR86_RS17010 ABZR86_RS17010 LacI family DNA-binding transcriptional regulator - strong

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