Gene info for ABZR86_RS15980 in Dyella japonica UNC79MFTsu3.2

Updated annotation (from data): homoserine kinase (EC 2.7.1.39)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00191.
Original annotation: homoserine kinase
Type 1: Protein-coding gene
Located on scaffold NZ_JBFBVS010000001, - strand, nucleotides 3,602,147 to 3,603,103
See nucleotide sequence around ABZR86_RS15980 or for all of scaffold NZ_JBFBVS010000001

Other databases: NCBI, other: N515DRAFT_0576, uniprot: A0A1I2JN98

Nearby Genes

500 ntABZR86_RS15955 and ABZR86_RS15960 overlap by 4 nucleotidesABZR86_RS15960 and ABZR86_RS15965 overlap by 4 nucleotidesABZR86_RS15965 and ABZR86_RS15970 overlap by 4 nucleotidesABZR86_RS15970 and ABZR86_RS15975 are separated by 675 nucleotidesABZR86_RS15975 and ABZR86_RS15980 overlap by 4 nucleotidesABZR86_RS15980 and ABZR86_RS15985 are separated by 32 nucleotidesABZR86_RS15985 and ABZR86_RS15990 are separated by 253 nucleotidesABZR86_RS15990 and ABZR86_RS15995 are separated by 77 nucleotidesABZR86_RS15995 and ABZR86_RS16000 are separated by 181 nucleotidesABZR86_RS16000 and ABZR86_RS16005 are separated by 245 nucleotides ABZR86_RS15955: ABZR86_RS15955 - 3-isopropylmalate dehydratase small subunit, at 3,595,611 to 3,596,195 _RS15955 ABZR86_RS15960: ABZR86_RS15960 - 3-isopropylmalate dehydratase large subunit, at 3,596,192 to 3,597,607 _RS15960 ABZR86_RS15965: ABZR86_RS15965 - branched-chain amino acid transaminase, at 3,597,604 to 3,598,545 _RS15965 ABZR86_RS15970: ABZR86_RS15970 - 2-isopropylmalate synthase, at 3,598,542 to 3,600,149 _RS15970 ABZR86_RS15975: ABZR86_RS15975 - threonine synthase (EC 4.2.3.1) (from data), at 3,600,825 to 3,602,150 _RS15975 ABZR86_RS15980: ABZR86_RS15980 - homoserine kinase (EC 2.7.1.39) (from data), at 3,602,147 to 3,603,103 _RS15980 ABZR86_RS15985: ABZR86_RS15985 - homoserine dehydrogenase, at 3,603,136 to 3,604,200 _RS15985 ABZR86_RS15990: ABZR86_RS15990 - hypothetical protein, at 3,604,454 to 3,604,588 _RS15990 ABZR86_RS15995: ABZR86_RS15995 - DUF2501 domain-containing protein, at 3,604,666 to 3,605,187 _RS15995 ABZR86_RS16000: ABZR86_RS16000 - bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase, at 3,605,369 to 3,607,354 _RS16000 ABZR86_RS16005: ABZR86_RS16005 - LTA synthase family protein, at 3,607,600 to 3,609,282 _RS16005
Locus Name Description Strand Phenotype
ABZR86_RS15955 ABZR86_RS15955 3-isopropylmalate dehydratase small subunit - strong
ABZR86_RS15960 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit - strong
ABZR86_RS15965 ABZR86_RS15965 branched-chain amino acid transaminase - strong
ABZR86_RS15970 ABZR86_RS15970 2-isopropylmalate synthase - strong
ABZR86_RS15975 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) - strong
ABZR86_RS15980 ABZR86_RS15980 homoserine kinase (EC 2.7.1.39) (from data) - strong
ABZR86_RS15985 ABZR86_RS15985 homoserine dehydrogenase - strong
ABZR86_RS15990 ABZR86_RS15990 hypothetical protein + insig.
ABZR86_RS15995 ABZR86_RS15995 DUF2501 domain-containing protein + insig.
ABZR86_RS16000 ABZR86_RS16000 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase - insig.
ABZR86_RS16005 ABZR86_RS16005 LTA synthase family protein + insig.

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