Gene info for ABZR86_RS03860 in Dyella japonica UNC79MFTsu3.2

Updated annotation (from data): Nitrite reductase (NAD(P)H) (EC 1.7.1.4)
Rationale: Specifically important for utilizing Sodium nitrate. Automated validation from mutant phenotype: the predicted function (1.7.1.4) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: nitrite reductase small subunit NirD
Type 1: Protein-coding gene
Located on scaffold NZ_JBFBVS010000001, + strand, nucleotides 839,768 to 840,106
See nucleotide sequence around ABZR86_RS03860 or for all of scaffold NZ_JBFBVS010000001

Other databases: NCBI, other: N515DRAFT_2363, uniprot: A0A1I1Z6H2

Nearby Genes

500 ntABZR86_RS03835 and ABZR86_RS03840 are separated by 265 nucleotidesABZR86_RS03840 and ABZR86_RS03845 are separated by 1 nucleotidesABZR86_RS03845 and ABZR86_RS03850 are separated by 300 nucleotidesABZR86_RS03850 and ABZR86_RS03855 are separated by 10 nucleotidesABZR86_RS03855 and ABZR86_RS03860 are separated by 4 nucleotidesABZR86_RS03860 and ABZR86_RS03865 overlap by 4 nucleotidesABZR86_RS03865 and ABZR86_RS03870 are separated by 31 nucleotidesABZR86_RS03870 and ABZR86_RS03875 overlap by 1 nucleotidesABZR86_RS03875 and ABZR86_RS03880 are separated by 33 nucleotidesABZR86_RS03880 and ABZR86_RS03885 are separated by 119 nucleotides ABZR86_RS03835: ABZR86_RS03835 - hypothetical protein, at 833,416 to 833,979 _RS03835 ABZR86_RS03840: ABZR86_RS03840 - hypothetical protein, at 834,245 to 834,637 _RS03840 ABZR86_RS03845: ABZR86_RS03845 - hypothetical protein, at 834,639 to 835,532 _RS03845 ABZR86_RS03850: ABZR86_RS03850 - MFS transporter, at 835,833 to 837,170 _RS03850 ABZR86_RS03855: ABZR86_RS03855 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data), at 837,181 to 839,763 _RS03855 ABZR86_RS03860: ABZR86_RS03860 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data), at 839,768 to 840,106 _RS03860 ABZR86_RS03865: ABZR86_RS03865 - Nitrate reductase (EC 1.7.99.4) (from data), at 840,103 to 842,814 _RS03865 ABZR86_RS03870: ABZR86_RS03870 - siroheme synthase CysG, at 842,846 to 844,282 _RS03870 ABZR86_RS03875: ABZR86_RS03875 - uroporphyrinogen-III synthase, at 844,282 to 845,112 _RS03875 ABZR86_RS03880: ABZR86_RS03880 - LysR family transcriptional regulator, at 845,146 to 845,994 _RS03880 ABZR86_RS03885: ABZR86_RS03885 - alpha/beta hydrolase, at 846,114 to 846,881 _RS03885
Locus Name Description Strand Phenotype
ABZR86_RS03835 ABZR86_RS03835 hypothetical protein - insig.
ABZR86_RS03840 ABZR86_RS03840 hypothetical protein + no data
ABZR86_RS03845 ABZR86_RS03845 hypothetical protein + insig.
ABZR86_RS03850 ABZR86_RS03850 MFS transporter + strong
ABZR86_RS03855 ABZR86_RS03855 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) + strong
ABZR86_RS03860 ABZR86_RS03860 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) + strong
ABZR86_RS03865 ABZR86_RS03865 Nitrate reductase (EC 1.7.99.4) (from data) + cofit
ABZR86_RS03870 ABZR86_RS03870 siroheme synthase CysG + insig.
ABZR86_RS03875 ABZR86_RS03875 uroporphyrinogen-III synthase + strong
ABZR86_RS03880 ABZR86_RS03880 LysR family transcriptional regulator - insig.
ABZR86_RS03885 ABZR86_RS03885 alpha/beta hydrolase + insig.

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