Gene info for DvMF_3161 in Desulfovibrio vulgaris Miyazaki F

Updated annotation (from data): pyrroline-5-carboxylate reductase (EC 1.5.1.2)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00112.
Original annotation: pyrroline-5-carboxylate reductase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 254340, + strand, nucleotides 3,986,665 to 3,987,474
See nucleotide sequence around DvMF_3161 or for all of scaffold 254340

Other databases: MicrobesOnline, NCBI, IMG: 643541697, uniprot: B8DNF5

Nearby Genes

500 ntDvMF_3156 and DvMF_3157 are separated by 3 nucleotidesDvMF_3157 and DvMF_3158 are separated by 29 nucleotidesDvMF_3158 and DvMF_3159 are separated by 221 nucleotidesDvMF_3159 and DvMF_3160 are separated by 339 nucleotidesDvMF_3160 and DvMF_3161 are separated by 4 nucleotidesDvMF_3161 and DvMF_3162 are separated by 138 nucleotidesDvMF_3162 and DvMF_3163 are separated by 350 nucleotidesDvMF_3163 and DvMF_3164 are separated by 239 nucleotidesDvMF_3164 and DvMF_3165 are separated by 272 nucleotidesDvMF_3165 and DvMF_3166 are separated by 10 nucleotides DvMF_3156: DvMF_3156 - HhH-GPD family protein (RefSeq), at 3,980,666 to 3,981,337 _3156 DvMF_3157: DvMF_3157 - Peptidase M23 (RefSeq), at 3,981,341 to 3,982,717 _3157 DvMF_3158: DvMF_3158 - carboxyl-terminal protease (RefSeq), at 3,982,747 to 3,984,048 _3158 DvMF_3159: DvMF_3159 - protein of unknown function DUF610 YibQ (RefSeq), at 3,984,270 to 3,985,901 _3159 DvMF_3160: DvMF_3160 - Nucleoside-diphosphate kinase (RefSeq), at 3,986,241 to 3,986,660 _3160 DvMF_3161: DvMF_3161 - pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data), at 3,986,665 to 3,987,474 _3161 DvMF_3162: DvMF_3162 - Smr protein/MutS2 (RefSeq), at 3,987,613 to 3,988,965 _3162 DvMF_3163: DvMF_3163 - signal peptide peptidase SppA, 36K type (RefSeq), at 3,989,316 to 3,990,323 _3163 DvMF_3164: DvMF_3164 - Cobyrinic acid ac-diamide synthase (RefSeq), at 3,990,563 to 3,991,516 _3164 DvMF_3165: DvMF_3165 - hydrogenase accessory protein HypB (RefSeq), at 3,991,789 to 3,992,445 _3165 DvMF_3166: DvMF_3166 - hydrogenase expression/synthesis HypA (RefSeq), at 3,992,456 to 3,992,800 _3166
Locus Name Description Strand Phenotype
DvMF_3156 DvMF_3156 HhH-GPD family protein (RefSeq) + sig.
DvMF_3157 DvMF_3157 Peptidase M23 (RefSeq) + strong
DvMF_3158 DvMF_3158 carboxyl-terminal protease (RefSeq) + no data
DvMF_3159 DvMF_3159 protein of unknown function DUF610 YibQ (RefSeq) + strong
DvMF_3160 DvMF_3160 Nucleoside-diphosphate kinase (RefSeq) + no data
DvMF_3161 DvMF_3161 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) + strong
DvMF_3162 DvMF_3162 Smr protein/MutS2 (RefSeq) - insig.
DvMF_3163 DvMF_3163 signal peptide peptidase SppA, 36K type (RefSeq) + insig.
DvMF_3164 DvMF_3164 Cobyrinic acid ac-diamide synthase (RefSeq) - insig.
DvMF_3165 DvMF_3165 hydrogenase accessory protein HypB (RefSeq) - no data
DvMF_3166 DvMF_3166 hydrogenase expression/synthesis HypA (RefSeq) - no data

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