Gene info for DvMF_1398 in Desulfovibrio vulgaris Miyazaki F

Updated annotation (from data): ATP-dependent reduction of co(II)balamin (RamA-like)
Rationale: Cofit with the B12-dependent methionine synthase (DvMF_0476), which lacks a standard domain for the reactivation of vitamin B12.
Original annotation: iron-sulfur cluster-binding protein, putative (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 254340, + strand, nucleotides 1,704,829 to 1,706,886
See nucleotide sequence around DvMF_1398 or for all of scaffold 254340

Other databases: MicrobesOnline, NCBI, IMG: 643539905, uniprot: B8DRQ9

Nearby Genes

500 ntDvMF_1393 and DvMF_1394 overlap by 44 nucleotidesDvMF_1394 and truA are separated by 3 nucleotidestruA and DvMF_1396 are separated by 306 nucleotidesDvMF_1396 and DvMF_1397 are separated by 320 nucleotidesDvMF_1397 and DvMF_1398 are separated by 264 nucleotidesDvMF_1398 and DvMF_1399 are separated by 487 nucleotidesDvMF_1399 and DvMF_1400 are separated by 120 nucleotidesDvMF_1400 and DvMF_1401 overlap by 65 nucleotidesDvMF_1401 and DvMF_1402 are separated by 500 nucleotidesDvMF_1402 and DvMF_1403 are separated by 51 nucleotides DvMF_1393: DvMF_1393 - flagellar export protein FliJ (RefSeq), at 1,700,278 to 1,700,718 _1393 DvMF_1394: DvMF_1394 - hypothetical protein (RefSeq), at 1,700,675 to 1,701,652 _1394 DvMF_1395: truA - tRNA pseudouridine synthase A (RefSeq), at 1,701,656 to 1,702,489 truA DvMF_1396: DvMF_1396 - flagellar motor switch protein FliM (RefSeq), at 1,702,796 to 1,703,776 _1396 DvMF_1397: DvMF_1397 - hypothetical protein (RefSeq), at 1,704,097 to 1,704,564 _1397 DvMF_1398: DvMF_1398 - ATP-dependent reduction of co(II)balamin (RamA-like) (from data), at 1,704,829 to 1,706,886 _1398 DvMF_1399: DvMF_1399 - Ribosomal small subunit Rsm22 (RefSeq), at 1,707,374 to 1,710,295 _1399 DvMF_1400: DvMF_1400 - lipoate-protein ligase B (RefSeq), at 1,710,416 to 1,711,072 _1400 DvMF_1401: DvMF_1401 - lipoyl synthase (RefSeq), at 1,711,008 to 1,711,910 _1401 DvMF_1402: DvMF_1402 - RNA modification enzyme, MiaB family (RefSeq), at 1,712,411 to 1,713,799 _1402 DvMF_1403: DvMF_1403 - NLP/P60 protein (RefSeq), at 1,713,851 to 1,715,305 _1403
Locus Name Description Strand Phenotype
DvMF_1393 DvMF_1393 flagellar export protein FliJ (RefSeq) + strong
DvMF_1394 DvMF_1394 hypothetical protein (RefSeq) + strong
DvMF_1395 truA tRNA pseudouridine synthase A (RefSeq) + sig.
DvMF_1396 DvMF_1396 flagellar motor switch protein FliM (RefSeq) - strong
DvMF_1397 DvMF_1397 hypothetical protein (RefSeq) - insig.
DvMF_1398 DvMF_1398 ATP-dependent reduction of co(II)balamin (RamA-like) (from data) + strong
DvMF_1399 DvMF_1399 Ribosomal small subunit Rsm22 (RefSeq) + strong
DvMF_1400 DvMF_1400 lipoate-protein ligase B (RefSeq) + insig.
DvMF_1401 DvMF_1401 lipoyl synthase (RefSeq) + insig.
DvMF_1402 DvMF_1402 RNA modification enzyme, MiaB family (RefSeq) - insig.
DvMF_1403 DvMF_1403 NLP/P60 protein (RefSeq) - strong

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