Gene info for DvMF_0476 in Desulfovibrio vulgaris Miyazaki F

Updated annotation (from data): vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13)
Rationale: Important for fitness in most defined media and strongly cofit with the ATP-dependent co(II)balamin reductase (DvMF_1398). This lacks the usual reactivation domain for converting co(II)balamin to co(I)balamin; that activity is instead provided by DvMF_1398.
Original annotation: homocysteine S-methyltransferase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 254340, - strand, nucleotides 557,642 to 560,098
See nucleotide sequence around DvMF_0476 or for all of scaffold 254340

Other databases: MicrobesOnline, NCBI, IMG: 643538975, uniprot: B8DKK4

Nearby Genes

500 ntDvMF_0471 and DvMF_0472 are separated by 9 nucleotidesDvMF_0472 and DvMF_0473 are separated by 69 nucleotidesDvMF_0473 and DvMF_0474 are separated by 168 nucleotidesDvMF_0474 and DvMF_0475 are separated by 0 nucleotidesDvMF_0475 and DvMF_0476 are separated by 217 nucleotidesDvMF_0476 and DvMF_0477 are separated by 238 nucleotidesDvMF_0477 and DvMF_0478 are separated by 35 nucleotidesDvMF_0478 and DvMF_0479 overlap by 1 nucleotidesDvMF_0479 and DvMF_0480 are separated by 237 nucleotidesDvMF_0480 and DvMF_0481 are separated by 268 nucleotides DvMF_0471: DvMF_0471 - DNA repair protein RadA (RefSeq), at 553,249 to 554,727 _0471 DvMF_0472: DvMF_0472 - hypothetical protein (RefSeq), at 554,737 to 555,705 _0472 DvMF_0473: DvMF_0473 - hypoxanthine phosphoribosyltransferase (RefSeq), at 555,775 to 556,314 _0473 DvMF_0474: DvMF_0474 - acetyltransferase (RefSeq), at 556,483 to 556,950 _0474 DvMF_0475: DvMF_0475 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq), at 556,951 to 557,424 _0475 DvMF_0476: DvMF_0476 - vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) (from data), at 557,642 to 560,098 _0476 DvMF_0477: DvMF_0477 - putative RNA polymerase, sigma 70 family subunit (RefSeq), at 560,337 to 561,761 _0477 DvMF_0478: DvMF_0478 - Tetratricopeptide TPR_2 repeat protein (RefSeq), at 561,797 to 563,596 _0478 DvMF_0479: DvMF_0479 - hypothetical protein (RefSeq), at 563,596 to 564,486 _0479 DvMF_0480: DvMF_0480 - hypothetical protein (RefSeq), at 564,724 to 565,107 _0480 DvMF_0481: DvMF_0481 - sugar-phosphate isomerase, RpiB/LacA/LacB family (RefSeq), at 565,376 to 565,828 _0481
Locus Name Description Strand Phenotype
DvMF_0471 DvMF_0471 DNA repair protein RadA (RefSeq) - sig.
DvMF_0472 DvMF_0472 hypothetical protein (RefSeq) - strong
DvMF_0473 DvMF_0473 hypoxanthine phosphoribosyltransferase (RefSeq) - insig.
DvMF_0474 DvMF_0474 acetyltransferase (RefSeq) - strong
DvMF_0475 DvMF_0475 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) - sig.
DvMF_0476 DvMF_0476 vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) (from data) - strong
DvMF_0477 DvMF_0477 putative RNA polymerase, sigma 70 family subunit (RefSeq) + no data
DvMF_0478 DvMF_0478 Tetratricopeptide TPR_2 repeat protein (RefSeq) + no data
DvMF_0479 DvMF_0479 hypothetical protein (RefSeq) + no data
DvMF_0480 DvMF_0480 hypothetical protein (RefSeq) + insig.
DvMF_0481 DvMF_0481 sugar-phosphate isomerase, RpiB/LacA/LacB family (RefSeq) + no data

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