Gene info for Shewana3_3680 in Shewanella sp. ANA-3

Updated annotation (from data): Uridine phosphorylase (EC 2.4.2.3)
Rationale: Specifically important for utilizing Cytidine and Uridine. Automated validation from mutant phenotype: the predicted function (URPHOS-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: uridine phosphorylase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248374, - strand, nucleotides 4,419,221 to 4,419,979
See nucleotide sequence around Shewana3_3680 or for all of scaffold 248374

Other databases: MicrobesOnline, NCBI, IMG: 639728285, uniprot: A0L1I0

Nearby Genes

500 ntShewana3_3675 and Shewana3_3676 are separated by 206 nucleotidesShewana3_3676 and Shewana3_3677 overlap by 1 nucleotidesShewana3_3677 and Shewana3_3678 are separated by 11 nucleotidesShewana3_3678 and Shewana3_3679 are separated by 487 nucleotidesShewana3_3679 and Shewana3_3680 are separated by 109 nucleotidesShewana3_3680 and Shewana3_3681 are separated by 412 nucleotidesShewana3_3681 and Shewana3_3682 are separated by 59 nucleotidesShewana3_3682 and Shewana3_3683 are separated by 429 nucleotidesShewana3_3683 and Shewana3_3684 are separated by 168 nucleotidesShewana3_3684 and Shewana3_3685 are separated by 117 nucleotides Shewana3_3675: Shewana3_3675 - hypothetical protein (RefSeq), at 4,415,091 to 4,415,315 _3675 Shewana3_3676: Shewana3_3676 - SPFH domain-containing protein/band 7 family protein (RefSeq), at 4,415,522 to 4,416,454 _3676 Shewana3_3677: Shewana3_3677 - SPFH domain-containing protein/band 7 family protein (RefSeq), at 4,416,454 to 4,417,389 _3677 Shewana3_3678: Shewana3_3678 - hypothetical protein (RefSeq), at 4,417,401 to 4,417,871 _3678 Shewana3_3679: Shewana3_3679 - hypothetical protein (RefSeq), at 4,418,359 to 4,419,111 _3679 Shewana3_3680: Shewana3_3680 - Uridine phosphorylase (EC 2.4.2.3) (from data), at 4,419,221 to 4,419,979 _3680 Shewana3_3681: Shewana3_3681 - hypothetical protein (RefSeq), at 4,420,392 to 4,420,604 _3681 Shewana3_3682: Shewana3_3682 - ornithine decarboxylase (RefSeq), at 4,420,664 to 4,421,839 _3682 Shewana3_3683: Shewana3_3683 - hypothetical protein (RefSeq), at 4,422,269 to 4,422,748 _3683 Shewana3_3684: Shewana3_3684 - MscS mechanosensitive ion channel (RefSeq), at 4,422,917 to 4,423,753 _3684 Shewana3_3685: Shewana3_3685 - Sel1 domain-containing protein (RefSeq), at 4,423,871 to 4,425,409 _3685
Locus Name Description Strand Phenotype
Shewana3_3675 Shewana3_3675 hypothetical protein (RefSeq) + no data
Shewana3_3676 Shewana3_3676 SPFH domain-containing protein/band 7 family protein (RefSeq) - insig.
Shewana3_3677 Shewana3_3677 SPFH domain-containing protein/band 7 family protein (RefSeq) - insig.
Shewana3_3678 Shewana3_3678 hypothetical protein (RefSeq) - cofit
Shewana3_3679 Shewana3_3679 hypothetical protein (RefSeq) + insig.
Shewana3_3680 Shewana3_3680 Uridine phosphorylase (EC 2.4.2.3) (from data) - strong
Shewana3_3681 Shewana3_3681 hypothetical protein (RefSeq) + insig.
Shewana3_3682 Shewana3_3682 ornithine decarboxylase (RefSeq) - insig.
Shewana3_3683 Shewana3_3683 hypothetical protein (RefSeq) - cofit
Shewana3_3684 Shewana3_3684 MscS mechanosensitive ion channel (RefSeq) + insig.
Shewana3_3685 Shewana3_3685 Sel1 domain-containing protein (RefSeq) + insig.

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