Gene info for Shewana3_3110 in Shewanella sp. ANA-3

Updated annotation (from data): N-acetylglucosamine transporter nagP
Rationale: specific phenotype on NAG and D-glucosamine. This protein is similar to SO3503, which was named nagP (PMID:16857666). There is another putative glucosamine transporter (nagX, Shewana3_3111) but the phenotype of 3110 on glucosamine does not seem to be a polar effect. (It is observed on both strands, conserved in S. amazonensis SB2B, and 3110 is downstream of nagX). It apears that both nagP and nagX might be required for glucosamine utilization. NagX has weak similarity to acyltransferases (Q3UDW8, or possibly opgC from Rhodobacter sphaeroides) so nagX might convert glucosamine into another compound before transport by nagP. (SEED_correct)
Original annotation: glucose/galactose transporter (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248374, - strand, nucleotides 3,729,588 to 3,730,886
See nucleotide sequence around Shewana3_3110 or for all of scaffold 248374

Other databases: MicrobesOnline, NCBI, IMG: 639727714, uniprot: A0KZW5

Nearby Genes

500 ntShewana3_3105 and Shewana3_3106 are separated by 280 nucleotidesShewana3_3106 and Shewana3_3107 are separated by 50 nucleotidesShewana3_3107 and Shewana3_3108 are separated by 23 nucleotidesShewana3_3108 and Shewana3_3109 are separated by 185 nucleotidesShewana3_3109 and Shewana3_3110 are separated by 64 nucleotidesShewana3_3110 and Shewana3_3111 are separated by 339 nucleotidesShewana3_3111 and Shewana3_3112 are separated by 138 nucleotidesShewana3_3112 and Shewana3_3113 are separated by 43 nucleotidesShewana3_3113 and Shewana3_3114 are separated by 58 nucleotidesShewana3_3114 and Shewana3_3115 are separated by 224 nucleotides Shewana3_3105: Shewana3_3105 - aldehyde dehydrogenase (acceptor) (RefSeq), at 3,723,574 to 3,725,070 _3105 Shewana3_3106: Shewana3_3106 - beta alanine--pyruvate transaminase (RefSeq), at 3,725,351 to 3,726,691 _3106 Shewana3_3107: Shewana3_3107 - methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq), at 3,726,742 to 3,728,232 _3107 Shewana3_3108: Shewana3_3108 - protein of unknown function DUF861, cupin_3 (RefSeq), at 3,728,256 to 3,728,615 _3108 Shewana3_3109: Shewana3_3109 - hypothetical protein (RefSeq), at 3,728,801 to 3,729,523 _3109 Shewana3_3110: Shewana3_3110 - N-acetylglucosamine transporter nagP (from data), at 3,729,588 to 3,730,886 _3110 Shewana3_3111: Shewana3_3111 - transmembrane glucosamine N-acetyltransferase NagX (from data), at 3,731,226 to 3,732,413 _3111 Shewana3_3112: Shewana3_3112 - N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data), at 3,732,552 to 3,733,688 _3112 Shewana3_3113: Shewana3_3113 - Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data), at 3,733,732 to 3,734,730 _3113 Shewana3_3114: Shewana3_3114 - N-acetylglucosamine kinase (EC 2.7.1.59) (from data), at 3,734,789 to 3,735,697 _3114 Shewana3_3115: Shewana3_3115 - beta-N-acetylhexosaminidase (RefSeq), at 3,735,922 to 3,738,729 _3115
Locus Name Description Strand Phenotype
Shewana3_3105 Shewana3_3105 aldehyde dehydrogenase (acceptor) (RefSeq) - strong
Shewana3_3106 Shewana3_3106 beta alanine--pyruvate transaminase (RefSeq) + cofit
Shewana3_3107 Shewana3_3107 methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq) + insig.
Shewana3_3108 Shewana3_3108 protein of unknown function DUF861, cupin_3 (RefSeq) + insig.
Shewana3_3109 Shewana3_3109 hypothetical protein (RefSeq) + cofit
Shewana3_3110 Shewana3_3110 N-acetylglucosamine transporter nagP (from data) - strong
Shewana3_3111 Shewana3_3111 transmembrane glucosamine N-acetyltransferase NagX (from data) - strong
Shewana3_3112 Shewana3_3112 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) - strong
Shewana3_3113 Shewana3_3113 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) - strong
Shewana3_3114 Shewana3_3114 N-acetylglucosamine kinase (EC 2.7.1.59) (from data) - strong
Shewana3_3115 Shewana3_3115 beta-N-acetylhexosaminidase (RefSeq) - insig.

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