Gene info for Shewana3_2573 in Shewanella sp. ANA-3

Updated annotation (from data): Cytidine deaminase (EC 3.5.4.5)
Rationale: Specifically important for utilizing Cytidine. Automated validation from mutant phenotype: the predicted function (CYTIDEAM2-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: cytidine deaminase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248374, + strand, nucleotides 3,077,679 to 3,078,569
See nucleotide sequence around Shewana3_2573 or for all of scaffold 248374

Other databases: MicrobesOnline, NCBI, IMG: 639727176, uniprot: A0KYD1

Nearby Genes

500 ntShewana3_2568 and Shewana3_2569 are separated by 433 nucleotidesShewana3_2569 and rrmA are separated by 306 nucleotidesrrmA and Shewana3_2571 are separated by 33 nucleotidesShewana3_2571 and sbcB are separated by 175 nucleotidessbcB and Shewana3_2573 are separated by 212 nucleotidesShewana3_2573 and Shewana3_2574 are separated by 83 nucleotidesShewana3_2574 and Shewana3_2575 overlap by 20 nucleotidesShewana3_2575 and Shewana3_2576 are separated by 73 nucleotidesShewana3_2576 and Shewana3_2577 are separated by 350 nucleotidesShewana3_2577 and Shewana3_2578 are separated by 230 nucleotides Shewana3_2568: Shewana3_2568 - sulphate transporter (RefSeq), at 3,071,714 to 3,073,273 _2568 Shewana3_2569: Shewana3_2569 - cold-shock DNA-binding protein family protein (RefSeq), at 3,073,707 to 3,073,916 _2569 Shewana3_2570: rrmA - 23S rRNA methyltransferase A (RefSeq), at 3,074,223 to 3,075,038 rrmA Shewana3_2571: Shewana3_2571 - hypothetical protein (RefSeq), at 3,075,072 to 3,075,878 _2571 Shewana3_2572: sbcB - exonuclease I (RefSeq), at 3,076,054 to 3,077,466 sbcB Shewana3_2573: Shewana3_2573 - Cytidine deaminase (EC 3.5.4.5) (from data), at 3,077,679 to 3,078,569 _2573 Shewana3_2574: Shewana3_2574 - hypothetical protein (RefSeq), at 3,078,653 to 3,078,868 _2574 Shewana3_2575: Shewana3_2575 - glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq), at 3,078,849 to 3,079,196 _2575 Shewana3_2576: Shewana3_2576 - hypothetical protein (RefSeq), at 3,079,270 to 3,079,974 _2576 Shewana3_2577: Shewana3_2577 - glyoxalase family protein (RefSeq), at 3,080,325 to 3,080,705 _2577 Shewana3_2578: Shewana3_2578 - hypothetical protein (RefSeq), at 3,080,936 to 3,084,166 _2578
Locus Name Description Strand Phenotype
Shewana3_2568 Shewana3_2568 sulphate transporter (RefSeq) + insig.
Shewana3_2569 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq) - no data
Shewana3_2570 rrmA 23S rRNA methyltransferase A (RefSeq) - insig.
Shewana3_2571 Shewana3_2571 hypothetical protein (RefSeq) - insig.
Shewana3_2572 sbcB exonuclease I (RefSeq) + strong
Shewana3_2573 Shewana3_2573 Cytidine deaminase (EC 3.5.4.5) (from data) + strong
Shewana3_2574 Shewana3_2574 hypothetical protein (RefSeq) - no data
Shewana3_2575 Shewana3_2575 glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq) - no data
Shewana3_2576 Shewana3_2576 hypothetical protein (RefSeq) - cofit
Shewana3_2577 Shewana3_2577 glyoxalase family protein (RefSeq) + no data
Shewana3_2578 Shewana3_2578 hypothetical protein (RefSeq) + insig.

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