Gene info for Shewana3_2073 in Shewanella sp. ANA-3

Updated annotation (from data): L-arabinose ABC transporter, substrate-binding component AraU
Rationale: Specifically important for L-arabinose utilization; the gene name is from PMC2996990
Original annotation: periplasmic binding protein/LacI transcriptional regulator (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248374, + strand, nucleotides 2,481,278 to 2,482,219
See nucleotide sequence around Shewana3_2073 or for all of scaffold 248374

Other databases: MicrobesOnline, NCBI, IMG: 639726658, uniprot: A0KWY4

Nearby Genes

500 ntShewana3_2068 and Shewana3_2069 are separated by 109 nucleotidesShewana3_2069 and Shewana3_2070 are separated by 149 nucleotidesShewana3_2070 and Shewana3_2071 are separated by 60 nucleotidesShewana3_2071 and Shewana3_2072 are separated by 79 nucleotidesShewana3_2072 and Shewana3_2073 are separated by 98 nucleotidesShewana3_2073 and Shewana3_2074 are separated by 31 nucleotidesShewana3_2074 and Shewana3_2075 are separated by 0 nucleotidesShewana3_2075 and Shewana3_2076 overlap by 4 nucleotidesShewana3_2076 and Shewana3_2077 overlap by 26 nucleotidesShewana3_2077 and Shewana3_2078 are separated by 66 nucleotides Shewana3_2068: Shewana3_2068 - GntR family transcriptional regulator (RefSeq), at 2,475,530 to 2,476,246 _2068 Shewana3_2069: Shewana3_2069 - glycoside hydrolase family protein (RefSeq), at 2,476,356 to 2,477,303 _2069 Shewana3_2070: Shewana3_2070 - L-arabonate dehydratase (EC 4.2.1.25) (from data), at 2,477,453 to 2,479,213 _2070 Shewana3_2071: Shewana3_2071 - L-arabinose 1-dehydrogenase (EC 1.1.1.46) (from data), at 2,479,274 to 2,480,044 _2071 Shewana3_2072: Shewana3_2072 - L-arabinose 1-epimerase (mutarotase) (EC 5.1.3.3) (from data), at 2,480,124 to 2,481,179 _2072 Shewana3_2073: Shewana3_2073 - L-arabinose ABC transporter, substrate-binding component AraU (from data), at 2,481,278 to 2,482,219 _2073 Shewana3_2074: Shewana3_2074 - L-arabinose ABC transporter, ATPase component AraV (from data), at 2,482,251 to 2,483,750 _2074 Shewana3_2075: Shewana3_2075 - L-arabinose ABC transporter, permease component 1 AraW (from data), at 2,483,751 to 2,484,968 _2075 Shewana3_2076: Shewana3_2076 - L-arabinose ABC transporter, permease component 2 AraZ (from data), at 2,484,965 to 2,485,927 _2076 Shewana3_2077: Shewana3_2077 - glycoside hydrolase family protein (RefSeq), at 2,485,902 to 2,487,035 _2077 Shewana3_2078: Shewana3_2078 - glycoside hydrolase family protein (RefSeq), at 2,487,102 to 2,488,103 _2078
Locus Name Description Strand Phenotype
Shewana3_2068 Shewana3_2068 GntR family transcriptional regulator (RefSeq) + strong
Shewana3_2069 Shewana3_2069 glycoside hydrolase family protein (RefSeq) - cofit
Shewana3_2070 Shewana3_2070 L-arabonate dehydratase (EC 4.2.1.25) (from data) + strong
Shewana3_2071 Shewana3_2071 L-arabinose 1-dehydrogenase (EC 1.1.1.46) (from data) + strong
Shewana3_2072 Shewana3_2072 L-arabinose 1-epimerase (mutarotase) (EC 5.1.3.3) (from data) + strong
Shewana3_2073 Shewana3_2073 L-arabinose ABC transporter, substrate-binding component AraU (from data) + cofit
Shewana3_2074 Shewana3_2074 L-arabinose ABC transporter, ATPase component AraV (from data) + strong
Shewana3_2075 Shewana3_2075 L-arabinose ABC transporter, permease component 1 AraW (from data) + strong
Shewana3_2076 Shewana3_2076 L-arabinose ABC transporter, permease component 2 AraZ (from data) + cofit
Shewana3_2077 Shewana3_2077 glycoside hydrolase family protein (RefSeq) + insig.
Shewana3_2078 Shewana3_2078 glycoside hydrolase family protein (RefSeq) + insig.

Or browse nearby genes

Or see the comparative fitness browser