Gene info for Shewana3_2070 in Shewanella sp. ANA-3

Updated annotation (from data): L-arabonate dehydratase (EC 4.2.1.25)
Rationale: Specifically important for: L-Arabinose. L-arabonate is an intermediate in the oxidation of L-arabinose (SEED_correct)
Original annotation: dihydroxy-acid dehydratase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248374, + strand, nucleotides 2,477,453 to 2,479,213
See nucleotide sequence around Shewana3_2070 or for all of scaffold 248374

Other databases: MicrobesOnline, NCBI, IMG: 639726655, uniprot: A0KWY1

Nearby Genes

500 ntaraD and Shewana3_2066 are separated by 38 nucleotidesShewana3_2066 and Shewana3_2067 are separated by 76 nucleotidesShewana3_2067 and Shewana3_2068 are separated by 235 nucleotidesShewana3_2068 and Shewana3_2069 are separated by 109 nucleotidesShewana3_2069 and Shewana3_2070 are separated by 149 nucleotidesShewana3_2070 and Shewana3_2071 are separated by 60 nucleotidesShewana3_2071 and Shewana3_2072 are separated by 79 nucleotidesShewana3_2072 and Shewana3_2073 are separated by 98 nucleotidesShewana3_2073 and Shewana3_2074 are separated by 31 nucleotidesShewana3_2074 and Shewana3_2075 are separated by 0 nucleotides Shewana3_2065: araD - L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) (from data), at 2,472,373 to 2,473,068 araD Shewana3_2066: Shewana3_2066 - L-arabinose isomerase (EC 5.3.1.4) (from data), at 2,473,107 to 2,474,609 _2066 Shewana3_2067: Shewana3_2067 - HAD family hydrolase (RefSeq), at 2,474,686 to 2,475,294 _2067 Shewana3_2068: Shewana3_2068 - GntR family transcriptional regulator (RefSeq), at 2,475,530 to 2,476,246 _2068 Shewana3_2069: Shewana3_2069 - glycoside hydrolase family protein (RefSeq), at 2,476,356 to 2,477,303 _2069 Shewana3_2070: Shewana3_2070 - L-arabonate dehydratase (EC 4.2.1.25) (from data), at 2,477,453 to 2,479,213 _2070 Shewana3_2071: Shewana3_2071 - L-arabinose 1-dehydrogenase (EC 1.1.1.46) (from data), at 2,479,274 to 2,480,044 _2071 Shewana3_2072: Shewana3_2072 - L-arabinose 1-epimerase (mutarotase) (EC 5.1.3.3) (from data), at 2,480,124 to 2,481,179 _2072 Shewana3_2073: Shewana3_2073 - L-arabinose ABC transporter, substrate-binding component AraU (from data), at 2,481,278 to 2,482,219 _2073 Shewana3_2074: Shewana3_2074 - L-arabinose ABC transporter, ATPase component AraV (from data), at 2,482,251 to 2,483,750 _2074 Shewana3_2075: Shewana3_2075 - L-arabinose ABC transporter, permease component 1 AraW (from data), at 2,483,751 to 2,484,968 _2075
Locus Name Description Strand Phenotype
Shewana3_2065 araD L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) (from data) + strong
Shewana3_2066 Shewana3_2066 L-arabinose isomerase (EC 5.3.1.4) (from data) + strong
Shewana3_2067 Shewana3_2067 HAD family hydrolase (RefSeq) + insig.
Shewana3_2068 Shewana3_2068 GntR family transcriptional regulator (RefSeq) + strong
Shewana3_2069 Shewana3_2069 glycoside hydrolase family protein (RefSeq) - cofit
Shewana3_2070 Shewana3_2070 L-arabonate dehydratase (EC 4.2.1.25) (from data) + strong
Shewana3_2071 Shewana3_2071 L-arabinose 1-dehydrogenase (EC 1.1.1.46) (from data) + strong
Shewana3_2072 Shewana3_2072 L-arabinose 1-epimerase (mutarotase) (EC 5.1.3.3) (from data) + strong
Shewana3_2073 Shewana3_2073 L-arabinose ABC transporter, substrate-binding component AraU (from data) + cofit
Shewana3_2074 Shewana3_2074 L-arabinose ABC transporter, ATPase component AraV (from data) + strong
Shewana3_2075 Shewana3_2075 L-arabinose ABC transporter, permease component 1 AraW (from data) + strong

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