Gene info for Shewana3_0023 in Shewanella sp. ANA-3

Name: fadA
Updated annotation (from data): Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Rationale: Specifically important for utilizing Tween 20. Automated validation from mutant phenotype: the predicted function (KETOACYLCOATHIOL-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: 3-ketoacyl-CoA thiolase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248374, - strand, nucleotides 28,251 to 29,414
See nucleotide sequence around Shewana3_0023 or for all of scaffold 248374

Other databases: MicrobesOnline, NCBI, IMG: 639724539, uniprot: A0KR49

Nearby Genes

500 ntShewana3_0018 and Shewana3_0019 are separated by 85 nucleotidesShewana3_0019 and Shewana3_0020 are separated by 181 nucleotidesShewana3_0020 and Shewana3_0021 are separated by 35 nucleotidesShewana3_0021 and Shewana3_0022 are separated by 152 nucleotidesShewana3_0022 and fadA are separated by 224 nucleotidesfadA and fadB are separated by 22 nucleotidesfadB and Shewana3_0025 are separated by 443 nucleotidesShewana3_0025 and Shewana3_0026 are separated by 15 nucleotidesShewana3_0026 and Shewana3_0027 are separated by 77 nucleotidesShewana3_0027 and Shewana3_0028 are separated by 1 nucleotides Shewana3_0018: Shewana3_0018 - DNA-3-methyladenine glycosylase I (RefSeq), at 21,913 to 22,488 _0018 Shewana3_0019: Shewana3_0019 - amidohydrolase (RefSeq), at 22,574 to 25,762 _0019 Shewana3_0020: Shewana3_0020 - MOSC domain-containing protein (RefSeq), at 25,944 to 26,381 _0020 Shewana3_0021: Shewana3_0021 - sulfur transfer protein SirA (RefSeq), at 26,417 to 26,662 _0021 Shewana3_0022: Shewana3_0022 - diguanylate cyclase (RefSeq), at 26,815 to 28,026 _0022 Shewana3_0023: fadA - Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data), at 28,251 to 29,414 fadA Shewana3_0024: fadB - Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) (from data), at 29,437 to 31,587 fadB Shewana3_0025: Shewana3_0025 - proline dipeptidase (RefSeq), at 32,031 to 33,350 _0025 Shewana3_0026: Shewana3_0026 - hypothetical protein (RefSeq), at 33,366 to 33,980 _0026 Shewana3_0027: Shewana3_0027 - TrkH family potassium uptake protein (RefSeq), at 34,058 to 35,515 _0027 Shewana3_0028: Shewana3_0028 - protoporphyrinogen oxidase (RefSeq), at 35,517 to 36,041 _0028
Locus Name Description Strand Phenotype
Shewana3_0018 Shewana3_0018 DNA-3-methyladenine glycosylase I (RefSeq) + insig.
Shewana3_0019 Shewana3_0019 amidohydrolase (RefSeq) - cofit
Shewana3_0020 Shewana3_0020 MOSC domain-containing protein (RefSeq) - cofit
Shewana3_0021 Shewana3_0021 sulfur transfer protein SirA (RefSeq) - no data
Shewana3_0022 Shewana3_0022 diguanylate cyclase (RefSeq) - insig.
Shewana3_0023 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) - strong
Shewana3_0024 fadB Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) (from data) - strong
Shewana3_0025 Shewana3_0025 proline dipeptidase (RefSeq) + insig.
Shewana3_0026 Shewana3_0026 hypothetical protein (RefSeq) + cofit
Shewana3_0027 Shewana3_0027 TrkH family potassium uptake protein (RefSeq) + strong
Shewana3_0028 Shewana3_0028 protoporphyrinogen oxidase (RefSeq) + sig.

Or browse nearby genes

Or see the comparative fitness browser