Gene info for Sama_3201 in Shewanella amazonensis SB2B

Updated annotation (from data): Formiminoglutamase (EC 3.5.3.8)
Rationale: Specifically important for utilizing L-Histidine. Automated validation from mutant phenotype: the predicted function (FORMIMINOGLUTAMASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: arginase/agmatinase/formiminoglutamase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 3,791,925 to 3,792,962
See nucleotide sequence around Sama_3201 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518742479, uniprot: A1SAJ7

Nearby Genes

500 ntSama_3196 and Sama_3197 overlap by 33 nucleotidesSama_3197 and Sama_3198 are separated by 19 nucleotidesSama_3198 and Sama_3199 are separated by 105 nucleotidesSama_3199 and Sama_3200 are separated by 340 nucleotidesSama_3200 and Sama_3201 are separated by 163 nucleotidesSama_3201 and Sama_3202 are separated by 230 nucleotidesSama_3202 and Sama_3203 overlap by 1 nucleotidesSama_3203 and Sama_3204 overlap by 4 nucleotidesSama_3204 and Sama_3205 are separated by 62 nucleotidesSama_3205 and Sama_3206 are separated by 6 nucleotides Sama_3196: Sama_3196 - acetyl-CoA carboxylase, biotin carboxylase (RefSeq), at 3,787,677 to 3,789,041 _3196 Sama_3197: Sama_3197 - hypothetical protein (RefSeq), at 3,789,009 to 3,790,049 _3197 Sama_3198: Sama_3198 - PAP2 family protein (RefSeq), at 3,790,069 to 3,790,581 _3198 Sama_3199: Sama_3199 - hypothetical protein (RefSeq), at 3,790,687 to 3,790,935 _3199 Sama_3200: Sama_3200 - ribonuclease activity regulator protein RraA (RefSeq), at 3,791,276 to 3,791,761 _3200 Sama_3201: Sama_3201 - Formiminoglutamase (EC 3.5.3.8) (from data), at 3,791,925 to 3,792,962 _3201 Sama_3202: Sama_3202 - ubiquinone/menaquinone biosynthesis methlytransferase UbiE (RefSeq), at 3,793,193 to 3,793,948 _3202 Sama_3203: Sama_3203 - hypothetical protein (RefSeq), at 3,793,948 to 3,794,565 _3203 Sama_3204: Sama_3204 - ubiquinone biosynthesis protein AarF (RefSeq), at 3,794,562 to 3,796,211 _3204 Sama_3205: Sama_3205 - Sec-independent protein translocase protein TatA (RefSeq), at 3,796,274 to 3,796,507 _3205 Sama_3206: Sama_3206 - twin-arginine translocation protein TatB (RefSeq), at 3,796,514 to 3,796,891 _3206
Locus Name Description Strand Phenotype
Sama_3196 Sama_3196 acetyl-CoA carboxylase, biotin carboxylase (RefSeq) + cofit
Sama_3197 Sama_3197 hypothetical protein (RefSeq) - insig.
Sama_3198 Sama_3198 PAP2 family protein (RefSeq) - insig.
Sama_3199 Sama_3199 hypothetical protein (RefSeq) - sig.
Sama_3200 Sama_3200 ribonuclease activity regulator protein RraA (RefSeq) + strong
Sama_3201 Sama_3201 Formiminoglutamase (EC 3.5.3.8) (from data) + strong
Sama_3202 Sama_3202 ubiquinone/menaquinone biosynthesis methlytransferase UbiE (RefSeq) + no data
Sama_3203 Sama_3203 hypothetical protein (RefSeq) + strong
Sama_3204 Sama_3204 ubiquinone biosynthesis protein AarF (RefSeq) + no data
Sama_3205 Sama_3205 Sec-independent protein translocase protein TatA (RefSeq) + no data
Sama_3206 Sama_3206 twin-arginine translocation protein TatB (RefSeq) + no data

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