Gene info for Sama_3048 in Shewanella amazonensis SB2B

Name: tolC
Annotation: outer membrane channel protein (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 3,625,719 to 3,627,017
See nucleotide sequence around Sama_3048 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518742323, uniprot: A1SA44

Nearby Genes

500 ntSama_3043 and Sama_3044 are separated by 55 nucleotidesSama_3044 and Sama_3045 are separated by 28 nucleotidesSama_3045 and Sama_3046 are separated by 15 nucleotidesSama_3046 and Sama_3047 are separated by 11 nucleotidesSama_3047 and tolC are separated by 237 nucleotidestolC and Sama_3049 are separated by 58 nucleotidesSama_3049 and Sama_3050 are separated by 2 nucleotidesSama_3050 and Sama_3051 are separated by 14 nucleotidesSama_3051 and Sama_3052 are separated by 31 nucleotidesSama_3052 and Sama_3053 are separated by 74 nucleotides Sama_3043: Sama_3043 - DNA topoisomerase IV subunit B (RefSeq), at 3,621,035 to 3,622,921 _3043 Sama_3044: Sama_3044 - yqiA-like hydrolase, affects the cell envelope (from data), at 3,622,977 to 3,623,552 _3044 Sama_3045: Sama_3045 - lacZ expression regulator (RefSeq), at 3,623,581 to 3,624,420 _3045 Sama_3046: Sama_3046 - hypothetical protein (RefSeq), at 3,624,436 to 3,624,855 _3046 Sama_3047: Sama_3047 - ADP-ribose diphosphatase (RefSeq), at 3,624,867 to 3,625,481 _3047 Sama_3048: tolC - outer membrane channel protein (RefSeq), at 3,625,719 to 3,627,017 tolC Sama_3049: Sama_3049 - hypothetical protein (RefSeq), at 3,627,076 to 3,627,816 _3049 Sama_3050: Sama_3050 - hypothetical protein (RefSeq), at 3,627,819 to 3,628,790 _3050 Sama_3051: Sama_3051 - hypothetical protein (RefSeq), at 3,628,805 to 3,629,284 _3051 Sama_3052: Sama_3052 - enoyl-CoA hydratase/isomerase family protein (RefSeq), at 3,629,316 to 3,630,056 _3052 Sama_3053: Sama_3053 - hypothetical protein (RefSeq), at 3,630,131 to 3,630,328 _3053
Locus Name Description Strand Phenotype
Sama_3043 Sama_3043 DNA topoisomerase IV subunit B (RefSeq) - no data
Sama_3044 Sama_3044 yqiA-like hydrolase, affects the cell envelope (from data) - strong
Sama_3045 Sama_3045 lacZ expression regulator (RefSeq) - strong
Sama_3046 Sama_3046 hypothetical protein (RefSeq) - insig.
Sama_3047 Sama_3047 ADP-ribose diphosphatase (RefSeq) - insig.
Sama_3048 tolC outer membrane channel protein (RefSeq) + strong
Sama_3049 Sama_3049 hypothetical protein (RefSeq) - sig.
Sama_3050 Sama_3050 hypothetical protein (RefSeq) - sig.
Sama_3051 Sama_3051 hypothetical protein (RefSeq) - sig.
Sama_3052 Sama_3052 enoyl-CoA hydratase/isomerase family protein (RefSeq) + insig.
Sama_3053 Sama_3053 hypothetical protein (RefSeq) - insig.

Or browse nearby genes

Or see the comparative fitness browser